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LINC00894 (long intergenic non-protein coding RNA 894)

Identity

Other alias-
HGNC (Hugo) LINC00894
LocusID (NCBI) 100272228
Atlas_Id 65653
Location Xq28  [Link to chromosome band Xq28]
Location_base_pair Starts at 149938548 and ends at 150016787 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00894   48579
Cards
Entrez_Gene (NCBI)LINC00894  100272228  long intergenic non-protein coding RNA 894
Aliases
GeneCards (Weizmann)LINC00894
Ensembl hg19 (Hinxton)ENSG00000235703 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235703 [Gene_View]  chrX:149938548-150016787 [Contig_View]  LINC00894 [Vega]
ICGC DataPortalENSG00000235703
TCGA cBioPortalLINC00894
AceView (NCBI)LINC00894
Genatlas (Paris)LINC00894
WikiGenes100272228
SOURCE (Princeton)LINC00894
Genetics Home Reference (NIH)LINC00894
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00894  -     chrX:149938548-150016787 +  Xq28   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00894  -     Xq28   [Description]    (hg19-Feb_2009)
EnsemblLINC00894 - Xq28 [CytoView hg19]  LINC00894 - Xq28 [CytoView hg38]
Mapping of homologs : NCBILINC00894 [Mapview hg19]  LINC00894 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK054813 AK126415 BC032484 DA306809 U66046
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00894
Cluster EST : UnigeneHs.496916 [ NCBI ]
CGAP (NCI)Hs.496916
Alternative Splicing GalleryENSG00000235703
Gene ExpressionLINC00894 [ NCBI-GEO ]   LINC00894 [ EBI - ARRAY_EXPRESS ]   LINC00894 [ SEEK ]   LINC00894 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00894 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100272228
GTEX Portal (Tissue expression)LINC00894
Human Protein AtlasENSG00000235703-LINC00894 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00894
DMDM Disease mutations100272228
Blocks (Seattle)LINC00894
Human Protein Atlas [tissue]ENSG00000235703-LINC00894 [tissue]
Protein Interaction databases
FunCoupENSG00000235703
BioGRIDLINC00894
STRING (EMBL)LINC00894
ZODIACLINC00894
Ontologies - Pathways
Huge Navigator LINC00894 [HugePedia]
snp3D : Map Gene to Disease100272228
BioCentury BCIQLINC00894
ClinGenLINC00894
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100272228
Clinical trialLINC00894
Miscellaneous
canSAR (ICR)LINC00894 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00894
EVEXLINC00894
GoPubMedLINC00894
iHOPLINC00894
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:59:53 CET 2017

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