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LINC00896 (long intergenic non-protein coding RNA 896)

Identity

Alias_symbol (synonym)FLJ32575
Other alias-
HGNC (Hugo) LINC00896
LocusID (NCBI) 150197
Atlas_Id 65655
Location 22q11.21  [Link to chromosome band 22q11]
Location_base_pair Starts at 20206397 and ends at 20208524 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00896   26519
Cards
Entrez_Gene (NCBI)LINC00896  150197  long intergenic non-protein coding RNA 896
Aliases
GeneCards (Weizmann)LINC00896
Ensembl hg19 (Hinxton)ENSG00000236499 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236499 [Gene_View]  chr22:20206397-20208524 [Contig_View]  LINC00896 [Vega]
ICGC DataPortalENSG00000236499
TCGA cBioPortalLINC00896
AceView (NCBI)LINC00896
Genatlas (Paris)LINC00896
WikiGenes150197
SOURCE (Princeton)LINC00896
Genetics Home Reference (NIH)LINC00896
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00896  -     chr22:20206397-20208524 +  22q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00896  -     22q11.21   [Description]    (hg19-Feb_2009)
EnsemblLINC00896 - 22q11.21 [CytoView hg19]  LINC00896 - 22q11.21 [CytoView hg38]
Mapping of homologs : NCBILINC00896 [Mapview hg19]  LINC00896 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057137 BU584467 BU585161 BX114609 CR456358
RefSeq transcript (Entrez)NM_152508
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00896
Cluster EST : UnigeneHs.635544 [ NCBI ]
CGAP (NCI)Hs.635544
Alternative Splicing GalleryENSG00000236499
Gene ExpressionLINC00896 [ NCBI-GEO ]   LINC00896 [ EBI - ARRAY_EXPRESS ]   LINC00896 [ SEEK ]   LINC00896 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00896 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)150197
GTEX Portal (Tissue expression)LINC00896
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00896
DMDM Disease mutations150197
Blocks (Seattle)LINC00896
Human Protein AtlasENSG00000236499
IPIIPI00065470   
Protein Interaction databases
FunCoupENSG00000236499
BioGRIDLINC00896
STRING (EMBL)LINC00896
ZODIACLINC00896
Ontologies - Pathways
Huge Navigator LINC00896 [HugePedia]
snp3D : Map Gene to Disease150197
BioCentury BCIQLINC00896
ClinGenLINC00896
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD150197
Clinical trialLINC00896
Miscellaneous
canSAR (ICR)LINC00896 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00896
EVEXLINC00896
GoPubMedLINC00896
iHOPLINC00896
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:57:32 CEST 2017

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