Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC00919 (long intergenic non-protein coding RNA 919)

Identity

Other alias-
HGNC (Hugo) LINC00919
LocusID (NCBI) 100505619
Atlas_Id 65669
Location 16q12.1  [Link to chromosome band 16q12]
Location_base_pair Starts at 52083065 and ends at 52085109 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00919   48610
Cards
Entrez_Gene (NCBI)LINC00919  100505619  long intergenic non-protein coding RNA 919
Aliases
GeneCards (Weizmann)LINC00919
Ensembl hg19 (Hinxton)ENSG00000260268 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260268 [Gene_View]  chr16:52083065-52085109 [Contig_View]  LINC00919 [Vega]
ICGC DataPortalENSG00000260268
TCGA cBioPortalLINC00919
AceView (NCBI)LINC00919
Genatlas (Paris)LINC00919
WikiGenes100505619
SOURCE (Princeton)LINC00919
Genetics Home Reference (NIH)LINC00919
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00919  -     chr16:52083065-52085109 -  16q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00919  -     16q12.1   [Description]    (hg19-Feb_2009)
EnsemblLINC00919 - 16q12.1 [CytoView hg19]  LINC00919 - 16q12.1 [CytoView hg38]
Mapping of homologs : NCBILINC00919 [Mapview hg19]  LINC00919 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK098676 BC034401 BC070369 BC105278
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00919
Cluster EST : UnigeneHs.535454 [ NCBI ]
CGAP (NCI)Hs.535454
Alternative Splicing GalleryENSG00000260268
Gene ExpressionLINC00919 [ NCBI-GEO ]   LINC00919 [ EBI - ARRAY_EXPRESS ]   LINC00919 [ SEEK ]   LINC00919 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00919 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505619
GTEX Portal (Tissue expression)LINC00919
Human Protein AtlasENSG00000260268-LINC00919 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00919
DMDM Disease mutations100505619
Blocks (Seattle)LINC00919
Human Protein Atlas [tissue]ENSG00000260268-LINC00919 [tissue]
Protein Interaction databases
FunCoupENSG00000260268
BioGRIDLINC00919
STRING (EMBL)LINC00919
ZODIACLINC00919
Ontologies - Pathways
Huge Navigator LINC00919 [HugePedia]
snp3D : Map Gene to Disease100505619
BioCentury BCIQLINC00919
ClinGenLINC00919
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505619
Clinical trialLINC00919
Miscellaneous
canSAR (ICR)LINC00919 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00919
EVEXLINC00919
GoPubMedLINC00919
iHOPLINC00919
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:33:27 CET 2017

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