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LINC00920 (long intergenic non-protein coding RNA 920)

Identity

Other alias-
HGNC (Hugo) LINC00920
LocusID (NCBI) 100505865
Atlas_Id 65670
Location 16q21  [Link to chromosome band 16q21]
Location_base_pair Starts at 66408524 and ends at 66410900 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00920   48611
Cards
Entrez_Gene (NCBI)LINC00920  100505865  long intergenic non-protein coding RNA 920
Aliases
GeneCards (Weizmann)LINC00920
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr16:66408524-66410900 [Contig_View]  LINC00920 [Vega]
TCGA cBioPortalLINC00920
AceView (NCBI)LINC00920
Genatlas (Paris)LINC00920
WikiGenes100505865
SOURCE (Princeton)LINC00920
Genetics Home Reference (NIH)LINC00920
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00920  -     chr16:66408524-66410900 +  16q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00920  -     16q21   [Description]    (hg19-Feb_2009)
EnsemblLINC00920 - 16q21 [CytoView hg19]  LINC00920 - 16q21 [CytoView hg38]
Mapping of homologs : NCBILINC00920 [Mapview hg19]  LINC00920 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056683 AW015153 DA813001
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00920
Cluster EST : UnigeneHs.314372 [ NCBI ]
CGAP (NCI)Hs.314372
Gene ExpressionLINC00920 [ NCBI-GEO ]   LINC00920 [ EBI - ARRAY_EXPRESS ]   LINC00920 [ SEEK ]   LINC00920 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00920 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505865
GTEX Portal (Tissue expression)LINC00920
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00920
DMDM Disease mutations100505865
Blocks (Seattle)LINC00920
Protein Interaction databases
BioGRIDLINC00920
STRING (EMBL)LINC00920
ZODIACLINC00920
Ontologies - Pathways
Huge Navigator LINC00920 [HugePedia]
snp3D : Map Gene to Disease100505865
BioCentury BCIQLINC00920
ClinGenLINC00920
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505865
Clinical trialLINC00920
Miscellaneous
canSAR (ICR)LINC00920 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00920
EVEXLINC00920
GoPubMedLINC00920
iHOPLINC00920
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:33:27 CET 2017

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