Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC00921 (long intergenic non-protein coding RNA 921)

Identity

Alias_symbol (synonym)FLJ39639
Other alias-
HGNC (Hugo) LINC00921
LocusID (NCBI) 283876
Atlas_Id 65671
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 3313768 and ends at 3317566 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00921   26830
Cards
Entrez_Gene (NCBI)LINC00921  283876  long intergenic non-protein coding RNA 921
Aliases
GeneCards (Weizmann)LINC00921
Ensembl hg19 (Hinxton)ENSG00000006194 [Gene_View]  chr16:3313768-3317566 [Contig_View]  LINC00921 [Vega]
Ensembl hg38 (Hinxton)ENSG00000006194 [Gene_View]  chr16:3313768-3317566 [Contig_View]  LINC00921 [Vega]
ICGC DataPortalENSG00000006194
TCGA cBioPortalLINC00921
AceView (NCBI)LINC00921
Genatlas (Paris)LINC00921
WikiGenes283876
SOURCE (Princeton)LINC00921
Genetics Home Reference (NIH)LINC00921
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00921  -     chr16:3313768-3317566 +  16p13.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00921  -     16p13.3   [Description]    (hg38-Dec_2013)
EnsemblLINC00921 - 16p13.3 [CytoView hg19]  LINC00921 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBILINC00921 [Mapview hg19]  LINC00921 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI816936 AK096958 BC104941 BC104943 DA532447
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010393 NW_004929400
Consensus coding sequences : CCDS (NCBI)LINC00921
Cluster EST : UnigeneHs.592092 [ NCBI ]
CGAP (NCI)Hs.592092
Alternative Splicing GalleryENSG00000006194
Gene ExpressionLINC00921 [ NCBI-GEO ]   LINC00921 [ EBI - ARRAY_EXPRESS ]   LINC00921 [ SEEK ]   LINC00921 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00921 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)283876
GTEX Portal (Tissue expression)LINC00921
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00921
DMDM Disease mutations283876
Blocks (Seattle)LINC00921
Human Protein AtlasENSG00000006194
IPIIPI00298139   
Protein Interaction databases
FunCoupENSG00000006194
BioGRIDLINC00921
STRING (EMBL)LINC00921
ZODIACLINC00921
Ontologies - Pathways
Huge Navigator LINC00921 [HugePedia]
snp3D : Map Gene to Disease283876
BioCentury BCIQLINC00921
ClinGenLINC00921
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283876
Clinical trialLINC00921
Miscellaneous
canSAR (ICR)LINC00921 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00921
EVEXLINC00921
GoPubMedLINC00921
iHOPLINC00921
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:12:37 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.