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LINC00939 (long intergenic non-protein coding RNA 939)

Identity

Other alias-
HGNC (Hugo) LINC00939
LocusID (NCBI) 400084
Atlas_Id 65686
Location 12q24.32  [Link to chromosome band 12q24]
Location_base_pair Starts at 125958686 and ends at 125983374 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00939   48631
Cards
Entrez_Gene (NCBI)LINC00939  400084  long intergenic non-protein coding RNA 939
Aliases
GeneCards (Weizmann)LINC00939
Ensembl hg19 (Hinxton)ENSG00000249267 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249267 [Gene_View]  chr12:125958686-125983374 [Contig_View]  LINC00939 [Vega]
ICGC DataPortalENSG00000249267
TCGA cBioPortalLINC00939
AceView (NCBI)LINC00939
Genatlas (Paris)LINC00939
WikiGenes400084
SOURCE (Princeton)LINC00939
Genetics Home Reference (NIH)LINC00939
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00939  -     chr12:125958686-125983374 -  12q24.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00939  -     12q24.32   [Description]    (hg19-Feb_2009)
EnsemblLINC00939 - 12q24.32 [CytoView hg19]  LINC00939 - 12q24.32 [CytoView hg38]
Mapping of homologs : NCBILINC00939 [Mapview hg19]  LINC00939 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057632 AL137270 BC057846
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00939
Cluster EST : UnigeneHs.156191 [ NCBI ]
CGAP (NCI)Hs.156191
Alternative Splicing GalleryENSG00000249267
Gene ExpressionLINC00939 [ NCBI-GEO ]   LINC00939 [ EBI - ARRAY_EXPRESS ]   LINC00939 [ SEEK ]   LINC00939 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00939 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)400084
GTEX Portal (Tissue expression)LINC00939
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00939
DMDM Disease mutations400084
Blocks (Seattle)LINC00939
Human Protein AtlasENSG00000249267
IPIIPI00848098   
Protein Interaction databases
FunCoupENSG00000249267
BioGRIDLINC00939
STRING (EMBL)LINC00939
ZODIACLINC00939
Ontologies - Pathways
Huge Navigator LINC00939 [HugePedia]
snp3D : Map Gene to Disease400084
BioCentury BCIQLINC00939
ClinGenLINC00939
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400084
Clinical trialLINC00939
Miscellaneous
canSAR (ICR)LINC00939 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00939
EVEXLINC00939
GoPubMedLINC00939
iHOPLINC00939
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:21:21 CEST 2017

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