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LINC00940 (long intergenic non-protein coding RNA 940)

Identity

Other alias-
HGNC (Hugo) LINC00940
LocusID (NCBI) 100271702
Atlas_Id 65687
Location 12p13.33  [Link to chromosome band 12p13]
Location_base_pair Starts at 1929202 and ends at 1936576 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00940   48634
Cards
Entrez_Gene (NCBI)LINC00940  100271702  long intergenic non-protein coding RNA 940
Aliases
GeneCards (Weizmann)LINC00940
Ensembl hg19 (Hinxton)ENSG00000235049 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235049 [Gene_View]  chr12:1929202-1936576 [Contig_View]  LINC00940 [Vega]
ICGC DataPortalENSG00000235049
TCGA cBioPortalLINC00940
AceView (NCBI)LINC00940
Genatlas (Paris)LINC00940
WikiGenes100271702
SOURCE (Princeton)LINC00940
Genetics Home Reference (NIH)LINC00940
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00940  -     chr12:1929202-1936576 -  12p13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00940  -     12p13.33   [Description]    (hg19-Feb_2009)
EnsemblLINC00940 - 12p13.33 [CytoView hg19]  LINC00940 - 12p13.33 [CytoView hg38]
Mapping of homologs : NCBILINC00940 [Mapview hg19]  LINC00940 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057909 AK296286 AK316036 DA269488
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00940
Cluster EST : UnigeneHs.737031 [ NCBI ]
CGAP (NCI)Hs.737031
Alternative Splicing GalleryENSG00000235049
Gene ExpressionLINC00940 [ NCBI-GEO ]   LINC00940 [ EBI - ARRAY_EXPRESS ]   LINC00940 [ SEEK ]   LINC00940 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00940 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100271702
GTEX Portal (Tissue expression)LINC00940
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00940
DMDM Disease mutations100271702
Blocks (Seattle)LINC00940
Human Protein AtlasENSG00000235049
Protein Interaction databases
FunCoupENSG00000235049
BioGRIDLINC00940
STRING (EMBL)LINC00940
ZODIACLINC00940
Ontologies - Pathways
Huge Navigator LINC00940 [HugePedia]
snp3D : Map Gene to Disease100271702
BioCentury BCIQLINC00940
ClinGenLINC00940
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100271702
Clinical trialLINC00940
Miscellaneous
canSAR (ICR)LINC00940 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00940
EVEXLINC00940
GoPubMedLINC00940
iHOPLINC00940
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:21:21 CEST 2017

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