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LINC00945 (long intergenic non-protein coding RNA 945)

Identity

Alias_symbol (synonym)TCONS_00028834
Other alias-
HGNC (Hugo) LINC00945
LocusID (NCBI) 101930746
Atlas_Id 65692
Location 21q22.11  [Link to chromosome band 21q22]
Location_base_pair Starts at 33057829 and ends at 33065079 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00945   48643
Cards
Entrez_Gene (NCBI)LINC00945  101930746  long intergenic non-protein coding RNA 945
Aliases
GeneCards (Weizmann)LINC00945
Ensembl hg19 (Hinxton)ENSG00000232539 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232539 [Gene_View]  chr21:33057829-33065079 [Contig_View]  LINC00945 [Vega]
ICGC DataPortalENSG00000232539
TCGA cBioPortalLINC00945
AceView (NCBI)LINC00945
Genatlas (Paris)LINC00945
WikiGenes101930746
SOURCE (Princeton)LINC00945
Genetics Home Reference (NIH)LINC00945
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00945  -     chr21:33057829-33065079 +  21q22.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00945  -     21q22.11   [Description]    (hg19-Feb_2009)
EnsemblLINC00945 - 21q22.11 [CytoView hg19]  LINC00945 - 21q22.11 [CytoView hg38]
Mapping of homologs : NCBILINC00945 [Mapview hg19]  LINC00945 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BF204217
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00945
Cluster EST : UnigeneHs.580934 [ NCBI ]
CGAP (NCI)Hs.580934
Alternative Splicing GalleryENSG00000232539
Gene ExpressionLINC00945 [ NCBI-GEO ]   LINC00945 [ EBI - ARRAY_EXPRESS ]   LINC00945 [ SEEK ]   LINC00945 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00945 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101930746
GTEX Portal (Tissue expression)LINC00945
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00945
DMDM Disease mutations101930746
Blocks (Seattle)LINC00945
Human Protein AtlasENSG00000232539
Protein Interaction databases
FunCoupENSG00000232539
BioGRIDLINC00945
STRING (EMBL)LINC00945
ZODIACLINC00945
Ontologies - Pathways
Huge Navigator LINC00945 [HugePedia]
snp3D : Map Gene to Disease101930746
BioCentury BCIQLINC00945
ClinGenLINC00945
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101930746
Clinical trialLINC00945
Miscellaneous
canSAR (ICR)LINC00945 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00945
EVEXLINC00945
GoPubMedLINC00945
iHOPLINC00945
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:57:42 CEST 2017

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