Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC00954 (long intergenic non-protein coding RNA 954)


Alias (NCBI)-
HGNC (Hugo) LINC00954
HGNC Alias symbFLJ12334
LocusID (NCBI) 400946
Atlas_Id 65696
Location 2p24.1  [Link to chromosome band 2p24]
Location_base_pair Starts at 19868854 and ends at 19885047 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC00954   48668
Entrez_Gene (NCBI)LINC00954    long intergenic non-protein coding RNA 954
GeneCards (Weizmann)LINC00954
Ensembl hg19 (Hinxton)ENSG00000228784 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228784 [Gene_View]  ENSG00000228784 [Sequence]  chr2:19868854-19885047 [Contig_View]  LINC00954 [Vega]
ICGC DataPortalENSG00000228784
TCGA cBioPortalLINC00954
AceView (NCBI)LINC00954
Genatlas (Paris)LINC00954
SOURCE (Princeton)LINC00954
Genetics Home Reference (NIH)LINC00954
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00954  -     chr2:19868854-19885047 +  2p24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00954  -     2p24.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC00954 - 2p24.1 [CytoView hg19]  LINC00954 - 2p24.1 [CytoView hg38]
Genome Data Viewer NCBILINC00954 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK022396 AK097927 BC068572 DB155534
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00954
Gene ExpressionLINC00954 [ NCBI-GEO ]   LINC00954 [ EBI - ARRAY_EXPRESS ]   LINC00954 [ SEEK ]   LINC00954 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00954 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00954 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)400946
GTEX Portal (Tissue expression)LINC00954
Human Protein AtlasENSG00000228784-LINC00954 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00954
Human Protein Atlas [tissue]ENSG00000228784-LINC00954 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:56:52 CEST 2021

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