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LINC00954 (long intergenic non-protein coding RNA 954)

Identity

Alias_symbol (synonym)FLJ12334
Other alias-
HGNC (Hugo) LINC00954
LocusID (NCBI) 400946
Atlas_Id 65696
Location 2p24.1  [Link to chromosome band 2p24]
Location_base_pair Starts at 19868854 and ends at 19885047 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00954   48668
Cards
Entrez_Gene (NCBI)LINC00954  400946  long intergenic non-protein coding RNA 954
Aliases
GeneCards (Weizmann)LINC00954
Ensembl hg19 (Hinxton)ENSG00000228784 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228784 [Gene_View]  chr2:19868854-19885047 [Contig_View]  LINC00954 [Vega]
ICGC DataPortalENSG00000228784
TCGA cBioPortalLINC00954
AceView (NCBI)LINC00954
Genatlas (Paris)LINC00954
WikiGenes400946
SOURCE (Princeton)LINC00954
Genetics Home Reference (NIH)LINC00954
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00954  -     chr2:19868854-19885047 +  2p24.1   [Description]    (hg38-Dec_2013)
LINC00954  -     2p24.1   [Description]    (hg19-Feb_2009)
EnsemblLINC00954 - 2p24.1 [CytoView hg19]  LINC00954 - 2p24.1 [CytoView hg38]
Mapping of homologs : NCBILINC00954 [Mapview hg19]  LINC00954 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK022396 AK097927 BC068572 DB155534
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00954
Cluster EST : UnigeneHs.289062 [ NCBI ]
CGAP (NCI)Hs.289062
Alternative Splicing GalleryENSG00000228784
Gene ExpressionLINC00954 [ NCBI-GEO ]   LINC00954 [ EBI - ARRAY_EXPRESS ]   LINC00954 [ SEEK ]   LINC00954 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00954 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)400946
GTEX Portal (Tissue expression)LINC00954
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00954
DMDM Disease mutations400946
Blocks (Seattle)LINC00954
Human Protein AtlasENSG00000228784
Protein Interaction databases
FunCoupENSG00000228784
BioGRIDLINC00954
STRING (EMBL)LINC00954
ZODIACLINC00954
Ontologies - Pathways
Huge Navigator LINC00954 [HugePedia]
snp3D : Map Gene to Disease400946
BioCentury BCIQLINC00954
ClinGenLINC00954
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400946
Clinical trialLINC00954
Miscellaneous
canSAR (ICR)LINC00954 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00954
EVEXLINC00954
GoPubMedLINC00954
iHOPLINC00954
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:48 CEST 2017

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