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LINC00959 (long intergenic non-protein coding RNA 959)

Identity

Other alias-
HGNC (Hugo) LINC00959
LocusID (NCBI) 387723
Atlas_Id 65700
Location 10q26.3  [Link to chromosome band 10q26]
Location_base_pair Starts at 130063898 and ends at 130110817 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00959   48677
Cards
Entrez_Gene (NCBI)LINC00959  387723  long intergenic non-protein coding RNA 959
Aliases
GeneCards (Weizmann)LINC00959
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:130063898-130110817 [Contig_View]  LINC00959 [Vega]
TCGA cBioPortalLINC00959
AceView (NCBI)LINC00959
Genatlas (Paris)LINC00959
WikiGenes387723
SOURCE (Princeton)LINC00959
Genetics Home Reference (NIH)LINC00959
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00959  -     chr10:130063898-130110817 -  10q26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00959  -     10q26.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00959 - 10q26.3 [CytoView hg19]  LINC00959 - 10q26.3 [CytoView hg38]
Mapping of homologs : NCBILINC00959 [Mapview hg19]  LINC00959 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK094118 AW135007 EU250747
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00959
Cluster EST : UnigeneHs.127394 [ NCBI ]
CGAP (NCI)Hs.127394
Gene ExpressionLINC00959 [ NCBI-GEO ]   LINC00959 [ EBI - ARRAY_EXPRESS ]   LINC00959 [ SEEK ]   LINC00959 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00959 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)387723
GTEX Portal (Tissue expression)LINC00959
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00959
DMDM Disease mutations387723
Blocks (Seattle)LINC00959
IPIIPI00909373   
Protein Interaction databases
BioGRIDLINC00959
STRING (EMBL)LINC00959
ZODIACLINC00959
Ontologies - Pathways
Huge Navigator LINC00959 [HugePedia]
snp3D : Map Gene to Disease387723
BioCentury BCIQLINC00959
ClinGenLINC00959
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD387723
Clinical trialLINC00959
Miscellaneous
canSAR (ICR)LINC00959 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00959
EVEXLINC00959
GoPubMedLINC00959
iHOPLINC00959
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:46:11 CET 2017

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