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LINC00971 (long intergenic non-protein coding RNA 971)

Identity

Other alias-
HGNC (Hugo) LINC00971
LocusID (NCBI) 440970
Atlas_Id 65710
Location 3p12.1  [Link to chromosome band 3p12]
Location_base_pair Starts at 84638405 and ends at 84869575 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00971   48737
Cards
Entrez_Gene (NCBI)LINC00971  440970  long intergenic non-protein coding RNA 971
Aliases
GeneCards (Weizmann)LINC00971
Ensembl hg19 (Hinxton)ENSG00000242641 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000242641 [Gene_View]  chr3:84638405-84869575 [Contig_View]  LINC00971 [Vega]
ICGC DataPortalENSG00000242641
TCGA cBioPortalLINC00971
AceView (NCBI)LINC00971
Genatlas (Paris)LINC00971
WikiGenes440970
SOURCE (Princeton)LINC00971
Genetics Home Reference (NIH)LINC00971
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00971  -     chr3:84638405-84869575 -  3p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00971  -     3p12.1   [Description]    (hg19-Feb_2009)
EnsemblLINC00971 - 3p12.1 [CytoView hg19]  LINC00971 - 3p12.1 [CytoView hg38]
Mapping of homologs : NCBILINC00971 [Mapview hg19]  LINC00971 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC068246
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00971
Cluster EST : UnigeneHs.411049 [ NCBI ]
CGAP (NCI)Hs.411049
Alternative Splicing GalleryENSG00000242641
Gene ExpressionLINC00971 [ NCBI-GEO ]   LINC00971 [ EBI - ARRAY_EXPRESS ]   LINC00971 [ SEEK ]   LINC00971 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00971 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)440970
GTEX Portal (Tissue expression)LINC00971
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00971
DMDM Disease mutations440970
Blocks (Seattle)LINC00971
Human Protein AtlasENSG00000242641
IPIIPI00747467   
Protein Interaction databases
FunCoupENSG00000242641
BioGRIDLINC00971
STRING (EMBL)LINC00971
ZODIACLINC00971
Ontologies - Pathways
Huge Navigator LINC00971 [HugePedia]
snp3D : Map Gene to Disease440970
BioCentury BCIQLINC00971
ClinGenLINC00971
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440970
Clinical trialLINC00971
Miscellaneous
canSAR (ICR)LINC00971 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00971
EVEXLINC00971
GoPubMedLINC00971
iHOPLINC00971
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:50 CEST 2017

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