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LINC00977 (long intergenic non-protein coding RNA 977)

Identity

Other alias-
HGNC (Hugo) LINC00977
LocusID (NCBI) 728724
Atlas_Id 65712
Location 8q24.21  [Link to chromosome band 8q24]
Location_base_pair Starts at 129216467 and ends at 129241240 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00977   48902
Cards
Entrez_Gene (NCBI)LINC00977  728724  long intergenic non-protein coding RNA 977
Aliases
GeneCards (Weizmann)LINC00977
Ensembl hg19 (Hinxton)ENSG00000250400 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250400 [Gene_View]  chr8:129216467-129241240 [Contig_View]  LINC00977 [Vega]
ICGC DataPortalENSG00000250400
TCGA cBioPortalLINC00977
AceView (NCBI)LINC00977
Genatlas (Paris)LINC00977
WikiGenes728724
SOURCE (Princeton)LINC00977
Genetics Home Reference (NIH)LINC00977
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00977  -     chr8:129216467-129241240 -  8q24.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00977  -     8q24.21   [Description]    (hg19-Feb_2009)
EnsemblLINC00977 - 8q24.21 [CytoView hg19]  LINC00977 - 8q24.21 [CytoView hg38]
Mapping of homologs : NCBILINC00977 [Mapview hg19]  LINC00977 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI822106 BX090073
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00977
Cluster EST : UnigeneHs.49902 [ NCBI ]
CGAP (NCI)Hs.49902
Alternative Splicing GalleryENSG00000250400
Gene ExpressionLINC00977 [ NCBI-GEO ]   LINC00977 [ EBI - ARRAY_EXPRESS ]   LINC00977 [ SEEK ]   LINC00977 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00977 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)728724
GTEX Portal (Tissue expression)LINC00977
Human Protein AtlasENSG00000250400-LINC00977 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00977
DMDM Disease mutations728724
Blocks (Seattle)LINC00977
Human Protein Atlas [tissue]ENSG00000250400-LINC00977 [tissue]
Protein Interaction databases
FunCoupENSG00000250400
BioGRIDLINC00977
STRING (EMBL)LINC00977
ZODIACLINC00977
Ontologies - Pathways
Huge Navigator LINC00977 [HugePedia]
snp3D : Map Gene to Disease728724
BioCentury BCIQLINC00977
ClinGenLINC00977
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728724
Clinical trialLINC00977
Miscellaneous
canSAR (ICR)LINC00977 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00977
EVEXLINC00977
GoPubMedLINC00977
iHOPLINC00977
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:18:21 CET 2017

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