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LINC00993 (long intergenic non-protein coding RNA 993)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC00993
HGNC Alias symbTCONS_l2_00002973
LocusID (NCBI) 101929520
Atlas_Id 58219
Location 10p11.21  [Link to chromosome band 10p11]
Location_base_pair Starts at 37309186 and ends at 37347028 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC00993   48948
Cards
Entrez_Gene (NCBI)LINC00993    long intergenic non-protein coding RNA 993
Aliases
GeneCards (Weizmann)LINC00993
Ensembl hg19 (Hinxton)ENSG00000235687 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235687 [Gene_View]  ENSG00000235687 [Sequence]  chr10:37309186-37347028 [Contig_View]  LINC00993 [Vega]
ICGC DataPortalENSG00000235687
TCGA cBioPortalLINC00993
AceView (NCBI)LINC00993
Genatlas (Paris)LINC00993
SOURCE (Princeton)LINC00993
Genetics Home Reference (NIH)LINC00993
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00993  -     chr10:37309186-37347028 +  10p11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00993  -     10p11.21   [Description]    (hg19-Feb_2009)
GoldenPathLINC00993 - 10p11.21 [CytoView hg19]  LINC00993 - 10p11.21 [CytoView hg38]
ImmunoBaseENSG00000235687
Genome Data Viewer NCBILINC00993 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI733546 AI791937 AW451986 BX102924
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00993
Gene ExpressionLINC00993 [ NCBI-GEO ]   LINC00993 [ EBI - ARRAY_EXPRESS ]   LINC00993 [ SEEK ]   LINC00993 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00993 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00993 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101929520
GTEX Portal (Tissue expression)LINC00993
Human Protein AtlasENSG00000235687-LINC00993 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00993
Human Protein Atlas [tissue]ENSG00000235687-LINC00993 [tissue]
Protein Interaction databases
BioGRIDLINC00993
STRING (EMBL)LINC00993
ZODIACLINC00993
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC00993
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:16:11 CEST 2021

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