Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC00998 (long intergenic non-protein coding RNA 998)

Identity

Other alias-
HGNC (Hugo) LINC00998
LocusID (NCBI) 401397
Atlas_Id 65721
Location 7q31.1  [Link to chromosome band 7q31]
Location_base_pair Starts at 112756773 and ends at 112758637 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00998   48953
Cards
Entrez_Gene (NCBI)LINC00998  401397  long intergenic non-protein coding RNA 998
Aliases
GeneCards (Weizmann)LINC00998
Ensembl hg19 (Hinxton)ENSG00000214194 [Gene_View]  chr7:112756773-112758637 [Contig_View]  LINC00998 [Vega]
Ensembl hg38 (Hinxton)ENSG00000214194 [Gene_View]  chr7:112756773-112758637 [Contig_View]  LINC00998 [Vega]
ICGC DataPortalENSG00000214194
TCGA cBioPortalLINC00998
AceView (NCBI)LINC00998
Genatlas (Paris)LINC00998
WikiGenes401397
SOURCE (Princeton)LINC00998
Genetics Home Reference (NIH)LINC00998
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00998  -     chr7:112756773-112758637 -  7q31.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00998  -     7q31.1   [Description]    (hg38-Dec_2013)
EnsemblLINC00998 - 7q31.1 [CytoView hg19]  LINC00998 - 7q31.1 [CytoView hg38]
Mapping of homologs : NCBILINC00998 [Mapview hg19]  LINC00998 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC065765 BC107860 BQ446959 BU630382 BX537645
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929332
Consensus coding sequences : CCDS (NCBI)LINC00998
Cluster EST : UnigeneHs.117929 [ NCBI ]
CGAP (NCI)Hs.117929
Alternative Splicing GalleryENSG00000214194
Gene ExpressionLINC00998 [ NCBI-GEO ]   LINC00998 [ EBI - ARRAY_EXPRESS ]   LINC00998 [ SEEK ]   LINC00998 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00998 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)401397
GTEX Portal (Tissue expression)LINC00998
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00998
DMDM Disease mutations401397
Blocks (Seattle)LINC00998
Human Protein AtlasENSG00000214194
IPIIPI00844352   IPI00903087   IPI00926646   
Protein Interaction databases
FunCoupENSG00000214194
BioGRIDLINC00998
STRING (EMBL)LINC00998
ZODIACLINC00998
Ontologies - Pathways
Huge Navigator LINC00998 [HugePedia]
snp3D : Map Gene to Disease401397
BioCentury BCIQLINC00998
ClinGenLINC00998
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401397
Clinical trialLINC00998
Miscellaneous
canSAR (ICR)LINC00998 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00998
EVEXLINC00998
GoPubMedLINC00998
iHOPLINC00998
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:12:48 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.