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LINC00999 (long intergenic non-protein coding RNA 999)

Identity

Alias_symbol (synonym)FLJ44672
Other alias-
HGNC (Hugo) LINC00999
LocusID (NCBI) 399744
Atlas_Id 65722
Location 10p11.1  [Link to chromosome band 10p11]
Location_base_pair Starts at 38448344 and ends at 38452152 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)LINC00999   38537
Cards
Entrez_Gene (NCBI)LINC00999  399744  long intergenic non-protein coding RNA 999
Aliases
GeneCards (Weizmann)LINC00999
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:38448344-38452152 [Contig_View]  LINC00999 [Vega]
TCGA cBioPortalLINC00999
AceView (NCBI)LINC00999
Genatlas (Paris)LINC00999
WikiGenes399744
SOURCE (Princeton)LINC00999
Genetics Home Reference (NIH)LINC00999
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00999  -     chr10:38448344-38452152 +  10p11.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00999  -     10p11.1   [Description]    (hg19-Feb_2009)
EnsemblLINC00999 - 10p11.1 [CytoView hg19]  LINC00999 - 10p11.1 [CytoView hg38]
Mapping of homologs : NCBILINC00999 [Mapview hg19]  LINC00999 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128746 AK293765 AK311605 BQ000710 DQ599874
RefSeq transcript (Entrez)NM_001013665
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00999
Cluster EST : UnigeneHs.497951 [ NCBI ]
CGAP (NCI)Hs.497951
Gene ExpressionLINC00999 [ NCBI-GEO ]   LINC00999 [ EBI - ARRAY_EXPRESS ]   LINC00999 [ SEEK ]   LINC00999 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00999 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)399744
GTEX Portal (Tissue expression)LINC00999
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00999
DMDM Disease mutations399744
Blocks (Seattle)LINC00999
HPRD18408
IPIIPI00916024   
Protein Interaction databases
BioGRIDLINC00999
STRING (EMBL)LINC00999
ZODIACLINC00999
Ontologies - Pathways
Huge Navigator LINC00999 [HugePedia]
snp3D : Map Gene to Disease399744
BioCentury BCIQLINC00999
ClinGenLINC00999
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD399744
Clinical trialLINC00999
Miscellaneous
canSAR (ICR)LINC00999 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00999
EVEXLINC00999
GoPubMedLINC00999
iHOPLINC00999
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Feb 23 18:25:05 CET 2018
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