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LINC01000 (long intergenic non-protein coding RNA 1000)

Identity

Alias_symbol (synonym)FLJ45340
Other alias-
HGNC (Hugo) LINC01000
LocusID (NCBI) 402483
Atlas_Id 65723
Location 7q32.1  [Link to chromosome band 7q32]
Location_base_pair Starts at 128653856 and ends at 128655792 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01000   38541
Cards
Entrez_Gene (NCBI)LINC01000  402483  long intergenic non-protein coding RNA 1000
Aliases
GeneCards (Weizmann)LINC01000
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:128653856-128655792 [Contig_View]  LINC01000 [Vega]
TCGA cBioPortalLINC01000
AceView (NCBI)LINC01000
Genatlas (Paris)LINC01000
WikiGenes402483
SOURCE (Princeton)LINC01000
Genetics Home Reference (NIH)LINC01000
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01000  -     chr7:128653856-128655792 +  7q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01000  -     7q32.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01000 - 7q32.1 [CytoView hg19]  LINC01000 - 7q32.1 [CytoView hg38]
Mapping of homologs : NCBILINC01000 [Mapview hg19]  LINC01000 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093729 AK127273 AK294679 AK302487 AK304049
RefSeq transcript (Entrez)NM_001039682
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01000
Cluster EST : UnigeneHs.744076 [ NCBI ]
CGAP (NCI)Hs.744076
Gene ExpressionLINC01000 [ NCBI-GEO ]   LINC01000 [ EBI - ARRAY_EXPRESS ]   LINC01000 [ SEEK ]   LINC01000 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01000 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)402483
GTEX Portal (Tissue expression)LINC01000
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01000
DMDM Disease mutations402483
Blocks (Seattle)LINC01000
IPIIPI00418891   IPI00883808   
Protein Interaction databases
BioGRIDLINC01000
STRING (EMBL)LINC01000
ZODIACLINC01000
Ontologies - Pathways
Huge Navigator LINC01000 [HugePedia]
snp3D : Map Gene to Disease402483
BioCentury BCIQLINC01000
ClinGenLINC01000
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD402483
Clinical trialLINC01000
Miscellaneous
canSAR (ICR)LINC01000 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01000
EVEXLINC01000
GoPubMedLINC01000
iHOPLINC01000
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:57:49 CEST 2017

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