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LINC01002 (long intergenic non-protein coding RNA 1002)

Identity

Other alias-
HGNC (Hugo) LINC01002
LocusID (NCBI) 399844
Atlas_Id 65725
Location 9q34.3  [Link to chromosome band 9q34]
Location_base_pair Starts at 138277979 and ends at 138280567 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01002   38538
Cards
Entrez_Gene (NCBI)LINC01002  399844  long intergenic non-protein coding RNA 1002
Aliases
GeneCards (Weizmann)LINC01002
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:138277979-138280567 [Contig_View]  LINC01002 [Vega]
TCGA cBioPortalLINC01002
AceView (NCBI)LINC01002
Genatlas (Paris)LINC01002
WikiGenes399844
SOURCE (Princeton)LINC01002
Genetics Home Reference (NIH)LINC01002
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01002  -     chr9:138277979-138280567 +  9q34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01002  -     9q34.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01002 - 9q34.3 [CytoView hg19]  LINC01002 - 9q34.3 [CytoView hg38]
Mapping of homologs : NCBILINC01002 [Mapview hg19]  LINC01002 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128780 AK303004 BC117566
RefSeq transcript (Entrez)NM_001004321
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01002
Cluster EST : UnigeneHs.733048 [ NCBI ]
CGAP (NCI)Hs.733048
Gene ExpressionLINC01002 [ NCBI-GEO ]   LINC01002 [ EBI - ARRAY_EXPRESS ]   LINC01002 [ SEEK ]   LINC01002 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01002 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)399844
GTEX Portal (Tissue expression)LINC01002
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01002
DMDM Disease mutations399844
Blocks (Seattle)LINC01002
HPRD13506
IPIIPI00443480   
Protein Interaction databases
BioGRIDLINC01002
STRING (EMBL)LINC01002
ZODIACLINC01002
Ontologies - Pathways
Huge Navigator LINC01002 [HugePedia]
snp3D : Map Gene to Disease399844
BioCentury BCIQLINC01002
ClinGenLINC01002
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD399844
Clinical trialLINC01002
Miscellaneous
canSAR (ICR)LINC01002 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01002
EVEXLINC01002
GoPubMedLINC01002
iHOPLINC01002
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:38:53 CET 2017

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