Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01005 (long intergenic non-protein coding RNA 1005)

Identity

Other alias-
HGNC (Hugo) LINC01005
LocusID (NCBI) 100506050
Atlas_Id 65728
Location 7q11.21  [Link to chromosome band 7q11]
Location_base_pair Starts at 64024416 and ends at 64030102 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01005   48963
Cards
Entrez_Gene (NCBI)LINC01005  100506050  long intergenic non-protein coding RNA 1005
Aliases
GeneCards (Weizmann)LINC01005
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:64024416-64030102 [Contig_View]  LINC01005 [Vega]
TCGA cBioPortalLINC01005
AceView (NCBI)LINC01005
Genatlas (Paris)LINC01005
WikiGenes100506050
SOURCE (Princeton)LINC01005
Genetics Home Reference (NIH)LINC01005
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01005  -     chr7:64024416-64030102 -  7q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01005  -     7q11.21   [Description]    (hg19-Feb_2009)
EnsemblLINC01005 - 7q11.21 [CytoView hg19]  LINC01005 - 7q11.21 [CytoView hg38]
Mapping of homologs : NCBILINC01005 [Mapview hg19]  LINC01005 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC031977 BC038424 DB525991
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01005
Cluster EST : UnigeneHs.405628 [ NCBI ]
CGAP (NCI)Hs.405628
Gene ExpressionLINC01005 [ NCBI-GEO ]   LINC01005 [ EBI - ARRAY_EXPRESS ]   LINC01005 [ SEEK ]   LINC01005 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01005 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506050
GTEX Portal (Tissue expression)LINC01005
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01005
DMDM Disease mutations100506050
Blocks (Seattle)LINC01005
Protein Interaction databases
BioGRIDLINC01005
STRING (EMBL)LINC01005
ZODIACLINC01005
Ontologies - Pathways
Huge Navigator LINC01005 [HugePedia]
snp3D : Map Gene to Disease100506050
BioCentury BCIQLINC01005
ClinGenLINC01005
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506050
Clinical trialLINC01005
Miscellaneous
canSAR (ICR)LINC01005 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01005
EVEXLINC01005
GoPubMedLINC01005
iHOPLINC01005
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:52 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.