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LINC01007 (long intergenic non-protein coding RNA 1007)

Identity

Other alias-
HGNC (Hugo) LINC01007
LocusID (NCBI) 100506527
Atlas_Id 65730
Location 7q22.1  [Link to chromosome band 7q22]
Location_base_pair Starts at 101208587 and ends at 101212286 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01007   48973
Cards
Entrez_Gene (NCBI)LINC01007  100506527  long intergenic non-protein coding RNA 1007
Aliases
GeneCards (Weizmann)LINC01007
Ensembl hg19 (Hinxton)ENSG00000233123 [Gene_View]  chr7:101208587-101212286 [Contig_View]  LINC01007 [Vega]
Ensembl hg38 (Hinxton)ENSG00000233123 [Gene_View]  chr7:101208587-101212286 [Contig_View]  LINC01007 [Vega]
ICGC DataPortalENSG00000233123
TCGA cBioPortalLINC01007
AceView (NCBI)LINC01007
Genatlas (Paris)LINC01007
WikiGenes100506527
SOURCE (Princeton)LINC01007
Genetics Home Reference (NIH)LINC01007
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01007  -     chr7:101208587-101212286 -  7q22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01007  -     7q22.1   [Description]    (hg38-Dec_2013)
EnsemblLINC01007 - 7q22.1 [CytoView hg19]  LINC01007 - 7q22.1 [CytoView hg38]
Mapping of homologs : NCBILINC01007 [Mapview hg19]  LINC01007 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF131787 BC027906 BC039094 DA533941 HG500457
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929332
Consensus coding sequences : CCDS (NCBI)LINC01007
Cluster EST : UnigeneHs.535863 [ NCBI ]
CGAP (NCI)Hs.535863
Alternative Splicing GalleryENSG00000233123
Gene ExpressionLINC01007 [ NCBI-GEO ]   LINC01007 [ EBI - ARRAY_EXPRESS ]   LINC01007 [ SEEK ]   LINC01007 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01007 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506527
GTEX Portal (Tissue expression)LINC01007
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01007
DMDM Disease mutations100506527
Blocks (Seattle)LINC01007
Human Protein AtlasENSG00000233123
Protein Interaction databases
FunCoupENSG00000233123
BioGRIDLINC01007
STRING (EMBL)LINC01007
ZODIACLINC01007
Ontologies - Pathways
Huge Navigator LINC01007 [HugePedia]
snp3D : Map Gene to Disease100506527
BioCentury BCIQLINC01007
ClinGenLINC01007
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506527
Clinical trialLINC01007
Miscellaneous
canSAR (ICR)LINC01007 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01007
EVEXLINC01007
GoPubMedLINC01007
iHOPLINC01007
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:12:50 CET 2017

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