Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01010 (long intergenic non-protein coding RNA 1010)

Identity

Other alias-
HGNC (Hugo) LINC01010
LocusID (NCBI) 154092
Atlas_Id 65731
Location 6q23.2  [Link to chromosome band 6q23]
Location_base_pair Starts at 134437716 and ends at 134504020 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01010   48978
Cards
Entrez_Gene (NCBI)LINC01010  154092  long intergenic non-protein coding RNA 1010
Aliases
GeneCards (Weizmann)LINC01010
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:134437716-134504020 [Contig_View]  LINC01010 [Vega]
TCGA cBioPortalLINC01010
AceView (NCBI)LINC01010
Genatlas (Paris)LINC01010
WikiGenes154092
SOURCE (Princeton)LINC01010
Genetics Home Reference (NIH)LINC01010
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01010  -     chr6:134437716-134504020 +  6q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01010  -     6q23.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01010 - 6q23.2 [CytoView hg19]  LINC01010 - 6q23.2 [CytoView hg38]
Mapping of homologs : NCBILINC01010 [Mapview hg19]  LINC01010 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA952986 AK055166 BC041589 DA244667 DA265202
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01010
Cluster EST : UnigeneHs.223718 [ NCBI ]
CGAP (NCI)Hs.223718
Gene ExpressionLINC01010 [ NCBI-GEO ]   LINC01010 [ EBI - ARRAY_EXPRESS ]   LINC01010 [ SEEK ]   LINC01010 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01010 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)154092
GTEX Portal (Tissue expression)LINC01010
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01010
DMDM Disease mutations154092
Blocks (Seattle)LINC01010
Protein Interaction databases
BioGRIDLINC01010
STRING (EMBL)LINC01010
ZODIACLINC01010
Ontologies - Pathways
Huge Navigator LINC01010 [HugePedia]
snp3D : Map Gene to Disease154092
BioCentury BCIQLINC01010
ClinGenLINC01010
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD154092
Clinical trialLINC01010
Miscellaneous
canSAR (ICR)LINC01010 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01010
EVEXLINC01010
GoPubMedLINC01010
iHOPLINC01010
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:53:54 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.