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LINC01020 (long intergenic non-protein coding RNA 1020)

Identity

Other alias-
HGNC (Hugo) LINC01020
LocusID (NCBI) 340094
Atlas_Id 65741
Location 5p15.32  [Link to chromosome band 5p15]
Location_base_pair Starts at 5034359 and ends at 5070002 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01020   27968
Cards
Entrez_Gene (NCBI)LINC01020  340094  long intergenic non-protein coding RNA 1020
Aliases
GeneCards (Weizmann)LINC01020
Ensembl hg19 (Hinxton)ENSG00000215231 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000215231 [Gene_View]  chr5:5034359-5070002 [Contig_View]  LINC01020 [Vega]
ICGC DataPortalENSG00000215231
TCGA cBioPortalLINC01020
AceView (NCBI)LINC01020
Genatlas (Paris)LINC01020
WikiGenes340094
SOURCE (Princeton)LINC01020
Genetics Home Reference (NIH)LINC01020
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01020  -     chr5:5034359-5070002 +  5p15.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01020  -     5p15.32   [Description]    (hg19-Feb_2009)
EnsemblLINC01020 - 5p15.32 [CytoView hg19]  LINC01020 - 5p15.32 [CytoView hg38]
Mapping of homologs : NCBILINC01020 [Mapview hg19]  LINC01020 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC042977 BC113532 BC113534
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01020
Cluster EST : UnigeneHs.665092 [ NCBI ]
CGAP (NCI)Hs.665092
Alternative Splicing GalleryENSG00000215231
Gene ExpressionLINC01020 [ NCBI-GEO ]   LINC01020 [ EBI - ARRAY_EXPRESS ]   LINC01020 [ SEEK ]   LINC01020 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01020 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)340094
GTEX Portal (Tissue expression)LINC01020
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01020
DMDM Disease mutations340094
Blocks (Seattle)LINC01020
Human Protein AtlasENSG00000215231
Protein Interaction databases
FunCoupENSG00000215231
BioGRIDLINC01020
STRING (EMBL)LINC01020
ZODIACLINC01020
Ontologies - Pathways
Huge Navigator LINC01020 [HugePedia]
snp3D : Map Gene to Disease340094
BioCentury BCIQLINC01020
ClinGenLINC01020
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD340094
Chemical/Pharm GKB GenePA162411073
Clinical trialLINC01020
Miscellaneous
canSAR (ICR)LINC01020 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01020
EVEXLINC01020
GoPubMedLINC01020
iHOPLINC01020
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:57:53 CEST 2017

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