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LINC01028 (long intergenic non-protein coding RNA 1028)

Identity

Alias (NCBI)TCONS_00025127
HGNC (Hugo) LINC01028
HGNC Alias symbTCONS_00025127
LocusID (NCBI) 101928141
Atlas_Id 65745
Location 17q24.3  [Link to chromosome band 17q24]
Location_base_pair Starts at 70051271 and ends at 70068095 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC01028   49014
Cards
Entrez_Gene (NCBI)LINC01028    long intergenic non-protein coding RNA 1028
AliasesTCONS_00025127
GeneCards (Weizmann)LINC01028
Ensembl hg19 (Hinxton)ENSG00000267603 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267603 [Gene_View]  ENSG00000267603 [Sequence]  chr17:70051271-70068095 [Contig_View]  LINC01028 [Vega]
ICGC DataPortalENSG00000267603
TCGA cBioPortalLINC01028
AceView (NCBI)LINC01028
Genatlas (Paris)LINC01028
SOURCE (Princeton)LINC01028
Genetics Home Reference (NIH)LINC01028
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01028  -     chr17:70051271-70068095 +  17q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01028  -     17q24.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC01028 - 17q24.3 [CytoView hg19]  LINC01028 - 17q24.3 [CytoView hg38]
ImmunoBaseENSG00000267603
Genome Data Viewer NCBILINC01028 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI280429 BX647864 OA986838 OA986839
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01028
Gene ExpressionLINC01028 [ NCBI-GEO ]   LINC01028 [ EBI - ARRAY_EXPRESS ]   LINC01028 [ SEEK ]   LINC01028 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01028 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01028 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101928141
GTEX Portal (Tissue expression)LINC01028
Human Protein AtlasENSG00000267603-LINC01028 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01028
Human Protein Atlas [tissue]ENSG00000267603-LINC01028 [tissue]
Protein Interaction databases
BioGRIDLINC01028
STRING (EMBL)LINC01028
ZODIACLINC01028
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC01028
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:56:59 CEST 2021

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