Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC01031 (long intergenic non-protein coding RNA 1031)

Identity

Alias_symbol (synonym)TCONS_00000361
Other alias
HGNC (Hugo) LINC01031
LocusID (NCBI) 101929184
Atlas_Id 65748
Location 1q31.2  [Link to chromosome band 1q31]
Location_base_pair Starts at 193304745 and ends at 193365953 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01031   49017
Cards
Entrez_Gene (NCBI)LINC01031  101929184  long intergenic non-protein coding RNA 1031
AliasesTCONS_00000361
GeneCards (Weizmann)LINC01031
Ensembl hg19 (Hinxton)ENSG00000232077 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232077 [Gene_View]  chr1:193304745-193365953 [Contig_View]  LINC01031 [Vega]
ICGC DataPortalENSG00000232077
TCGA cBioPortalLINC01031
AceView (NCBI)LINC01031
Genatlas (Paris)LINC01031
WikiGenes101929184
SOURCE (Princeton)LINC01031
Genetics Home Reference (NIH)LINC01031
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01031  -     chr1:193304745-193365953 +  1q31.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01031  -     1q31.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01031 - 1q31.2 [CytoView hg19]  LINC01031 - 1q31.2 [CytoView hg38]
Mapping of homologs : NCBILINC01031 [Mapview hg19]  LINC01031 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI147111 BX100123
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01031
Cluster EST : UnigeneHs.738214 [ NCBI ]
CGAP (NCI)Hs.738214
Alternative Splicing GalleryENSG00000232077
Gene ExpressionLINC01031 [ NCBI-GEO ]   LINC01031 [ EBI - ARRAY_EXPRESS ]   LINC01031 [ SEEK ]   LINC01031 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01031 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929184
GTEX Portal (Tissue expression)LINC01031
Human Protein AtlasENSG00000232077-LINC01031 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01031
DMDM Disease mutations101929184
Blocks (Seattle)LINC01031
Human Protein Atlas [tissue]ENSG00000232077-LINC01031 [tissue]
Protein Interaction databases
FunCoupENSG00000232077
BioGRIDLINC01031
STRING (EMBL)LINC01031
ZODIACLINC01031
Ontologies - Pathways
Huge Navigator LINC01031 [HugePedia]
snp3D : Map Gene to Disease101929184
BioCentury BCIQLINC01031
ClinGenLINC01031
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929184
Clinical trialLINC01031
Miscellaneous
canSAR (ICR)LINC01031 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01031
EVEXLINC01031
GoPubMedLINC01031
iHOPLINC01031
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:55:22 CET 2017

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