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LINC01033 (long intergenic non-protein coding RNA 1033)

Identity

Other alias-
HGNC (Hugo) LINC01033
LocusID (NCBI) 104355136
Atlas_Id 77221
Location 5q11.2  [Link to chromosome band 5q11]
Location_base_pair Starts at 54320944 and ends at 54415125 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01033   49019
Cards
Entrez_Gene (NCBI)LINC01033  104355136  long intergenic non-protein coding RNA 1033
Aliases
GeneCards (Weizmann)LINC01033
Ensembl hg19 (Hinxton)ENSG00000249069 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249069 [Gene_View]  chr5:54320944-54415125 [Contig_View]  LINC01033 [Vega]
ICGC DataPortalENSG00000249069
TCGA cBioPortalLINC01033
AceView (NCBI)LINC01033
Genatlas (Paris)LINC01033
WikiGenes104355136
SOURCE (Princeton)LINC01033
Genetics Home Reference (NIH)LINC01033
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01033  -     chr5:54320944-54415125 +  5q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01033  -     5q11.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01033 - 5q11.2 [CytoView hg19]  LINC01033 - 5q11.2 [CytoView hg38]
Mapping of homologs : NCBILINC01033 [Mapview hg19]  LINC01033 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG181707 BG281020
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01033
Cluster EST : UnigeneHs.559024 [ NCBI ]
CGAP (NCI)Hs.559024
Alternative Splicing GalleryENSG00000249069
Gene ExpressionLINC01033 [ NCBI-GEO ]   LINC01033 [ EBI - ARRAY_EXPRESS ]   LINC01033 [ SEEK ]   LINC01033 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01033 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104355136
GTEX Portal (Tissue expression)LINC01033
Human Protein AtlasENSG00000249069-LINC01033 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01033
DMDM Disease mutations104355136
Blocks (Seattle)LINC01033
Human Protein Atlas [tissue]ENSG00000249069-LINC01033 [tissue]
Protein Interaction databases
FunCoupENSG00000249069
BioGRIDLINC01033
STRING (EMBL)LINC01033
ZODIACLINC01033
Ontologies - Pathways
Huge Navigator LINC01033 [HugePedia]
snp3D : Map Gene to Disease104355136
BioCentury BCIQLINC01033
ClinGenLINC01033
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104355136
Clinical trialLINC01033
Miscellaneous
canSAR (ICR)LINC01033 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01033
EVEXLINC01033
GoPubMedLINC01033
iHOPLINC01033
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:11:52 CET 2017

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