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LINC01040 (long intergenic non-protein coding RNA 1040)

Identity

Alias_symbol (synonym)TCONS_00021682
Other alias
HGNC (Hugo) LINC01040
LocusID (NCBI) 105370308
Atlas_Id 76823
Location 13q31.3  [Link to chromosome band 13q31]
Location_base_pair Starts at 89477607 and ends at 89500509 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01040   49028
Cards
Entrez_Gene (NCBI)LINC01040  105370308  long intergenic non-protein coding RNA 1040
AliasesTCONS_00021682
GeneCards (Weizmann)LINC01040
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:89477607-89500509 [Contig_View]  LINC01040 [Vega]
TCGA cBioPortalLINC01040
AceView (NCBI)LINC01040
Genatlas (Paris)LINC01040
WikiGenes105370308
SOURCE (Princeton)LINC01040
Genetics Home Reference (NIH)LINC01040
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01040  -     chr13:89477607-89500509 -  13q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01040  -     13q31.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01040 - 13q31.3 [CytoView hg19]  LINC01040 - 13q31.3 [CytoView hg38]
Mapping of homologs : NCBILINC01040 [Mapview hg19]  LINC01040 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI478937 BG192883 BG203629 BG205080 BG212965
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01040
Cluster EST : UnigeneHs.599406 [ NCBI ]
CGAP (NCI)Hs.599406
Gene ExpressionLINC01040 [ NCBI-GEO ]   LINC01040 [ EBI - ARRAY_EXPRESS ]   LINC01040 [ SEEK ]   LINC01040 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01040 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105370308
GTEX Portal (Tissue expression)LINC01040
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01040
DMDM Disease mutations105370308
Blocks (Seattle)LINC01040
Protein Interaction databases
BioGRIDLINC01040
STRING (EMBL)LINC01040
ZODIACLINC01040
Ontologies - Pathways
Huge Navigator LINC01040 [HugePedia]
snp3D : Map Gene to Disease105370308
BioCentury BCIQLINC01040
ClinGenLINC01040
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105370308
Clinical trialLINC01040
Miscellaneous
canSAR (ICR)LINC01040 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01040
EVEXLINC01040
GoPubMedLINC01040
iHOPLINC01040
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:57:57 CEST 2017

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