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LINC01048 (long intergenic non-protein coding RNA 1048)

Identity

Other alias-
HGNC (Hugo) LINC01048
LocusID (NCBI) 103695431
Atlas_Id 65754
Location 13q13.3  [Link to chromosome band 13q13]
Location_base_pair Starts at 37481465 and ends at 37484784 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01048   49042
Cards
Entrez_Gene (NCBI)LINC01048  103695431  long intergenic non-protein coding RNA 1048
Aliases
GeneCards (Weizmann)LINC01048
Ensembl hg19 (Hinxton)ENSG00000230390 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230390 [Gene_View]  chr13:37481465-37484784 [Contig_View]  LINC01048 [Vega]
ICGC DataPortalENSG00000230390
TCGA cBioPortalLINC01048
AceView (NCBI)LINC01048
Genatlas (Paris)LINC01048
WikiGenes103695431
SOURCE (Princeton)LINC01048
Genetics Home Reference (NIH)LINC01048
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01048  -     chr13:37481465-37484784 -  13q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01048  -     13q13.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01048 - 13q13.3 [CytoView hg19]  LINC01048 - 13q13.3 [CytoView hg38]
Mapping of homologs : NCBILINC01048 [Mapview hg19]  LINC01048 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX091314
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01048
Cluster EST : UnigeneHs.550637 [ NCBI ]
CGAP (NCI)Hs.550637
Alternative Splicing GalleryENSG00000230390
Gene ExpressionLINC01048 [ NCBI-GEO ]   LINC01048 [ EBI - ARRAY_EXPRESS ]   LINC01048 [ SEEK ]   LINC01048 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01048 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)103695431
GTEX Portal (Tissue expression)LINC01048
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01048
DMDM Disease mutations103695431
Blocks (Seattle)LINC01048
Human Protein AtlasENSG00000230390
Protein Interaction databases
FunCoupENSG00000230390
BioGRIDLINC01048
STRING (EMBL)LINC01048
ZODIACLINC01048
Ontologies - Pathways
Huge Navigator LINC01048 [HugePedia]
snp3D : Map Gene to Disease103695431
BioCentury BCIQLINC01048
ClinGenLINC01048
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD103695431
Clinical trialLINC01048
Miscellaneous
canSAR (ICR)LINC01048 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01048
EVEXLINC01048
GoPubMedLINC01048
iHOPLINC01048
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:56 CEST 2017

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