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LINC01054 (long intergenic non-protein coding RNA 1054)

Identity

Other alias-
HGNC (Hugo) LINC01054
LocusID (NCBI) 104355150
Atlas_Id 77193
Location 13q34  [Link to chromosome band 13q34]
Location_base_pair Starts at 114329757 and ends at 114333948 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01054   49048
Cards
Entrez_Gene (NCBI)LINC01054  104355150  long intergenic non-protein coding RNA 1054
Aliases
GeneCards (Weizmann)LINC01054
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:114329757-114333948 [Contig_View]  LINC01054 [Vega]
TCGA cBioPortalLINC01054
AceView (NCBI)LINC01054
Genatlas (Paris)LINC01054
WikiGenes104355150
SOURCE (Princeton)LINC01054
Genetics Home Reference (NIH)LINC01054
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01054  -     chr13:114329757-114333948 -  13q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01054  -     13q34   [Description]    (hg19-Feb_2009)
EnsemblLINC01054 - 13q34 [CytoView hg19]  LINC01054 - 13q34 [CytoView hg38]
Mapping of homologs : NCBILINC01054 [Mapview hg19]  LINC01054 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA321524 BG460330
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01054
Cluster EST : UnigeneHs.569217 [ NCBI ]
CGAP (NCI)Hs.569217
Gene ExpressionLINC01054 [ NCBI-GEO ]   LINC01054 [ EBI - ARRAY_EXPRESS ]   LINC01054 [ SEEK ]   LINC01054 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01054 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104355150
GTEX Portal (Tissue expression)LINC01054
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01054
DMDM Disease mutations104355150
Blocks (Seattle)LINC01054
Protein Interaction databases
BioGRIDLINC01054
STRING (EMBL)LINC01054
ZODIACLINC01054
Ontologies - Pathways
Huge Navigator LINC01054 [HugePedia]
snp3D : Map Gene to Disease104355150
BioCentury BCIQLINC01054
ClinGenLINC01054
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104355150
Clinical trialLINC01054
Miscellaneous
canSAR (ICR)LINC01054 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01054
EVEXLINC01054
GoPubMedLINC01054
iHOPLINC01054
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:28:29 CET 2017

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