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LINC01074 (long intergenic non-protein coding RNA 1074)

Identity

Other alias-
HGNC (Hugo) LINC01074
LocusID (NCBI) 106144607
Atlas_Id 80264
Location 13q21.31  [Link to chromosome band 13q21]
Location_base_pair Starts at 62321305 and ends at 62322398 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01074   49117
Cards
Entrez_Gene (NCBI)LINC01074  106144607  long intergenic non-protein coding RNA 1074
Aliases
GeneCards (Weizmann)LINC01074
Ensembl hg19 (Hinxton)ENSG00000227611 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227611 [Gene_View]  ENSG00000227611 [Sequence]  chr13:62321305-62322398 [Contig_View]  LINC01074 [Vega]
ICGC DataPortalENSG00000227611
TCGA cBioPortalLINC01074
AceView (NCBI)LINC01074
Genatlas (Paris)LINC01074
WikiGenes106144607
SOURCE (Princeton)LINC01074
Genetics Home Reference (NIH)LINC01074
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01074  -     chr13:62321305-62322398 +  13q21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01074  -     13q21.31   [Description]    (hg19-Feb_2009)
GoldenPathLINC01074 - 13q21.31 [CytoView hg19]  LINC01074 - 13q21.31 [CytoView hg38]
ImmunoBaseENSG00000227611
Mapping of homologs : NCBILINC01074 [Mapview hg19]  LINC01074 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI825329 BF057195 BF223798
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01074
Cluster EST : UnigeneHs.736213 [ NCBI ]
CGAP (NCI)Hs.736213
Alternative Splicing GalleryENSG00000227611
Gene ExpressionLINC01074 [ NCBI-GEO ]   LINC01074 [ EBI - ARRAY_EXPRESS ]   LINC01074 [ SEEK ]   LINC01074 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01074 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)106144607
GTEX Portal (Tissue expression)LINC01074
Human Protein AtlasENSG00000227611-LINC01074 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01074
DMDM Disease mutations106144607
Blocks (Seattle)LINC01074
Human Protein Atlas [tissue]ENSG00000227611-LINC01074 [tissue]
Protein Interaction databases
FunCoupENSG00000227611
BioGRIDLINC01074
STRING (EMBL)LINC01074
ZODIACLINC01074
Ontologies - Pathways
Huge Navigator LINC01074 [HugePedia]
snp3D : Map Gene to Disease106144607
BioCentury BCIQLINC01074
ClinGenLINC01074
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD106144607
Clinical trialLINC01074
Miscellaneous
canSAR (ICR)LINC01074 (select the gene name)
DataMed IndexLINC01074
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01074
EVEXLINC01074
GoPubMedLINC01074
iHOPLINC01074
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 15:35:32 CEST 2019

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