Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01082 (long intergenic non-protein coding RNA 1082)


Alias (NCBI)TCONS_00024492
HGNC (Hugo) LINC01082
HGNC Alias symbTCONS_00024492
LocusID (NCBI) 100506542
Atlas_Id 58356
Location 16q24.1  [Link to chromosome band 16q24]
Location_base_pair Starts at 86196181 and ends at 86199718 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC01082   49125
Entrez_Gene (NCBI)LINC01082    long intergenic non-protein coding RNA 1082
GeneCards (Weizmann)LINC01082
Ensembl hg19 (Hinxton)ENSG00000269186 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000269186 [Gene_View]  ENSG00000269186 [Sequence]  chr16:86196181-86199718 [Contig_View]  LINC01082 [Vega]
ICGC DataPortalENSG00000269186
TCGA cBioPortalLINC01082
AceView (NCBI)LINC01082
Genatlas (Paris)LINC01082
SOURCE (Princeton)LINC01082
Genetics Home Reference (NIH)LINC01082
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01082  -     chr16:86196181-86199718 +  16q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01082  -     16q24.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC01082 - 16q24.1 [CytoView hg19]  LINC01082 - 16q24.1 [CytoView hg38]
Genome Data Viewer NCBILINC01082 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA399680 AI676062 BP423579
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01082
Gene ExpressionLINC01082 [ NCBI-GEO ]   LINC01082 [ EBI - ARRAY_EXPRESS ]   LINC01082 [ SEEK ]   LINC01082 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01082 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01082 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100506542
GTEX Portal (Tissue expression)LINC01082
Human Protein AtlasENSG00000269186-LINC01082 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01082
Human Protein Atlas [tissue]ENSG00000269186-LINC01082 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:16:12 CEST 2021

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