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LINC01082 (long intergenic non-protein coding RNA 1082)

Identity

Alias (NCBI)TCONS_00024492
HGNC (Hugo) LINC01082
HGNC Alias symbTCONS_00024492
LocusID (NCBI) 100506542
Atlas_Id 58356
Location 16q24.1  [Link to chromosome band 16q24]
Location_base_pair Starts at 86196181 and ends at 86199718 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC01082   49125
Cards
Entrez_Gene (NCBI)LINC01082    long intergenic non-protein coding RNA 1082
AliasesTCONS_00024492
GeneCards (Weizmann)LINC01082
Ensembl hg19 (Hinxton)ENSG00000269186 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000269186 [Gene_View]  ENSG00000269186 [Sequence]  chr16:86196181-86199718 [Contig_View]  LINC01082 [Vega]
ICGC DataPortalENSG00000269186
TCGA cBioPortalLINC01082
AceView (NCBI)LINC01082
Genatlas (Paris)LINC01082
SOURCE (Princeton)LINC01082
Genetics Home Reference (NIH)LINC01082
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01082  -     chr16:86196181-86199718 +  16q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01082  -     16q24.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC01082 - 16q24.1 [CytoView hg19]  LINC01082 - 16q24.1 [CytoView hg38]
ImmunoBaseENSG00000269186
Genome Data Viewer NCBILINC01082 [Mapview hg19]  
OMIM614978   
Gene and transcription
Genbank (Entrez)AA399680 AI676062 BP423579
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01082
Gene ExpressionLINC01082 [ NCBI-GEO ]   LINC01082 [ EBI - ARRAY_EXPRESS ]   LINC01082 [ SEEK ]   LINC01082 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01082 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01082 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100506542
GTEX Portal (Tissue expression)LINC01082
Human Protein AtlasENSG00000269186-LINC01082 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01082
Human Protein Atlas [tissue]ENSG00000269186-LINC01082 [tissue]
Protein Interaction databases
BioGRIDLINC01082
STRING (EMBL)LINC01082
ZODIACLINC01082
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC01082
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:16:12 CEST 2021

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