Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01089 (long intergenic non-protein coding RNA 1089)


HGNC (Hugo) LINC01089
HGNC Alias symbLIMT
HGNC Alias namelong non coding RNA inhibiting metastasis
LocusID (NCBI) 338799
Atlas_Id 57204
Location 12q24.31  [Link to chromosome band 12q24]
Location_base_pair Starts at 121795267 and ends at 121802946 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC01089   27886
Entrez_Gene (NCBI)LINC01089    long intergenic non-protein coding RNA 1089
GeneCards (Weizmann)LINC01089
Ensembl hg19 (Hinxton)ENSG00000212694 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000212694 [Gene_View]  ENSG00000212694 [Sequence]  chr12:121795267-121802946 [Contig_View]  LINC01089 [Vega]
ICGC DataPortalENSG00000212694
TCGA cBioPortalLINC01089
AceView (NCBI)LINC01089
Genatlas (Paris)LINC01089
SOURCE (Princeton)LINC01089
Genetics Home Reference (NIH)LINC01089
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01089  -     chr12:121795267-121802946 -  12q24.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01089  -     12q24.31   [Description]    (hg19-Feb_2009)
GoldenPathLINC01089 - 12q24.31 [CytoView hg19]  LINC01089 - 12q24.31 [CytoView hg38]
genome Data Viewer NCBILINC01089 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK094482 AK095700 AK096174 AK311480 BC038786
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01089
Alternative Splicing GalleryENSG00000212694
Gene ExpressionLINC01089 [ NCBI-GEO ]   LINC01089 [ EBI - ARRAY_EXPRESS ]   LINC01089 [ SEEK ]   LINC01089 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01089 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01089 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)338799
GTEX Portal (Tissue expression)LINC01089
Human Protein AtlasENSG00000212694-LINC01089 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01089
Blocks (Seattle)LINC01089
Human Protein Atlas [tissue]ENSG00000212694-LINC01089 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 25 19:29:16 CET 2021

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