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LINC01089 (long intergenic non-protein coding RNA 1089)

Identity

Alias (NCBI)LIMT
HGNC (Hugo) LINC01089
HGNC Alias symbLIMT
AK096174
HGNC Alias namelong non coding RNA inhibiting metastasis
LocusID (NCBI) 338799
Atlas_Id 57204
Location 12q24.31  [Link to chromosome band 12q24]
Location_base_pair Starts at 121795267 and ends at 121802946 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC01089   27886
Cards
Entrez_Gene (NCBI)LINC01089    long intergenic non-protein coding RNA 1089
AliasesLIMT
GeneCards (Weizmann)LINC01089
Ensembl hg19 (Hinxton)ENSG00000212694 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000212694 [Gene_View]  ENSG00000212694 [Sequence]  chr12:121795267-121802946 [Contig_View]  LINC01089 [Vega]
ICGC DataPortalENSG00000212694
TCGA cBioPortalLINC01089
AceView (NCBI)LINC01089
Genatlas (Paris)LINC01089
SOURCE (Princeton)LINC01089
Genetics Home Reference (NIH)LINC01089
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01089  -     chr12:121795267-121802946 -  12q24.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01089  -     12q24.31   [Description]    (hg19-Feb_2009)
GoldenPathLINC01089 - 12q24.31 [CytoView hg19]  LINC01089 - 12q24.31 [CytoView hg38]
ImmunoBaseENSG00000212694
genome Data Viewer NCBILINC01089 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK094482 AK095700 AK096174 AK311480 BC038786
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01089
Alternative Splicing GalleryENSG00000212694
Gene ExpressionLINC01089 [ NCBI-GEO ]   LINC01089 [ EBI - ARRAY_EXPRESS ]   LINC01089 [ SEEK ]   LINC01089 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01089 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01089 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)338799
GTEX Portal (Tissue expression)LINC01089
Human Protein AtlasENSG00000212694-LINC01089 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01089
Blocks (Seattle)LINC01089
Human Protein Atlas [tissue]ENSG00000212694-LINC01089 [tissue]
IPIIPI00167717   
Protein Interaction databases
BioGRIDLINC01089
STRING (EMBL)LINC01089
ZODIACLINC01089
Ontologies - Pathways
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC01089
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 25 19:29:16 CET 2021

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