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LINC01096 (long intergenic non-protein coding RNA 1096)

Identity

Other alias-
HGNC (Hugo) LINC01096
LocusID (NCBI) 285548
Atlas_Id 65780
Location 4p15.33  [Link to chromosome band 4p15]
Location_base_pair Starts at 13546076 and ends at 13547824 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01096   27739
Cards
Entrez_Gene (NCBI)LINC01096  285548  long intergenic non-protein coding RNA 1096
Aliases
GeneCards (Weizmann)LINC01096
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:13546076-13547824 [Contig_View]  LINC01096 [Vega]
TCGA cBioPortalLINC01096
AceView (NCBI)LINC01096
Genatlas (Paris)LINC01096
WikiGenes285548
SOURCE (Princeton)LINC01096
Genetics Home Reference (NIH)LINC01096
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01096  -     chr4:13546076-13547824 -  4p15.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01096  -     4p15.33   [Description]    (hg19-Feb_2009)
EnsemblLINC01096 - 4p15.33 [CytoView hg19]  LINC01096 - 4p15.33 [CytoView hg38]
Mapping of homologs : NCBILINC01096 [Mapview hg19]  LINC01096 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK058104 BC035174 BC048110 BC053955 BG722070
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01096
Cluster EST : UnigeneHs.745454 [ NCBI ]
CGAP (NCI)Hs.745454
Gene ExpressionLINC01096 [ NCBI-GEO ]   LINC01096 [ EBI - ARRAY_EXPRESS ]   LINC01096 [ SEEK ]   LINC01096 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01096 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)285548
GTEX Portal (Tissue expression)LINC01096
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01096
DMDM Disease mutations285548
Blocks (Seattle)LINC01096
Protein Interaction databases
BioGRIDLINC01096
STRING (EMBL)LINC01096
ZODIACLINC01096
Ontologies - Pathways
Huge Navigator LINC01096 [HugePedia]
snp3D : Map Gene to Disease285548
BioCentury BCIQLINC01096
ClinGenLINC01096
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285548
Clinical trialLINC01096
Miscellaneous
canSAR (ICR)LINC01096 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01096
EVEXLINC01096
GoPubMedLINC01096
iHOPLINC01096
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:55:30 CET 2017

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