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LINC01104 (long intergenic non-protein coding RNA 1104)

Identity

Other alias-
HGNC (Hugo) LINC01104
LocusID (NCBI) 150577
Atlas_Id 65788
Location 2q11.2  [Link to chromosome band 2q11]
Location_base_pair Starts at 100208254 and ends at 100251484 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01104   49226
Cards
Entrez_Gene (NCBI)LINC01104  150577  long intergenic non-protein coding RNA 1104
Aliases
GeneCards (Weizmann)LINC01104
Ensembl hg19 (Hinxton)ENSG00000232084 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232084 [Gene_View]  chr2:100208254-100251484 [Contig_View]  LINC01104 [Vega]
ICGC DataPortalENSG00000232084
TCGA cBioPortalLINC01104
AceView (NCBI)LINC01104
Genatlas (Paris)LINC01104
WikiGenes150577
SOURCE (Princeton)LINC01104
Genetics Home Reference (NIH)LINC01104
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01104  -     chr2:100208254-100251484 +  2q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01104  -     2q11.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01104 - 2q11.2 [CytoView hg19]  LINC01104 - 2q11.2 [CytoView hg38]
Mapping of homologs : NCBILINC01104 [Mapview hg19]  LINC01104 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056640 BC105017 BC105019
RefSeq transcript (Entrez)NM_001102655
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01104
Cluster EST : UnigeneHs.434127 [ NCBI ]
CGAP (NCI)Hs.434127
Alternative Splicing GalleryENSG00000232084
Gene ExpressionLINC01104 [ NCBI-GEO ]   LINC01104 [ EBI - ARRAY_EXPRESS ]   LINC01104 [ SEEK ]   LINC01104 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01104 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)150577
GTEX Portal (Tissue expression)LINC01104
Human Protein AtlasENSG00000232084-LINC01104 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01104
DMDM Disease mutations150577
Blocks (Seattle)LINC01104
Human Protein Atlas [tissue]ENSG00000232084-LINC01104 [tissue]
Protein Interaction databases
FunCoupENSG00000232084
BioGRIDLINC01104
STRING (EMBL)LINC01104
ZODIACLINC01104
Ontologies - Pathways
Huge Navigator LINC01104 [HugePedia]
snp3D : Map Gene to Disease150577
BioCentury BCIQLINC01104
ClinGenLINC01104
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD150577
Clinical trialLINC01104
Miscellaneous
canSAR (ICR)LINC01104 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01104
EVEXLINC01104
GoPubMedLINC01104
iHOPLINC01104
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:38:14 CET 2017

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