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LINC01111 (long intergenic non-protein coding RNA 1111)

Identity

Other alias-
HGNC (Hugo) LINC01111
LocusID (NCBI) 101926978
Atlas_Id 65794
Location 8q21.13  [Link to chromosome band 8q21]
Location_base_pair Starts at 76406654 and ends at 76524332 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01111   49237
Cards
Entrez_Gene (NCBI)LINC01111  101926978  long intergenic non-protein coding RNA 1111
Aliases
GeneCards (Weizmann)LINC01111
Ensembl hg19 (Hinxton)ENSG00000254300 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000254300 [Gene_View]  chr8:76406654-76524332 [Contig_View]  LINC01111 [Vega]
ICGC DataPortalENSG00000254300
TCGA cBioPortalLINC01111
AceView (NCBI)LINC01111
Genatlas (Paris)LINC01111
WikiGenes101926978
SOURCE (Princeton)LINC01111
Genetics Home Reference (NIH)LINC01111
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01111  -     chr8:76406654-76524332 +  8q21.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01111  -     8q21.13   [Description]    (hg19-Feb_2009)
EnsemblLINC01111 - 8q21.13 [CytoView hg19]  LINC01111 - 8q21.13 [CytoView hg38]
Mapping of homologs : NCBILINC01111 [Mapview hg19]  LINC01111 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC015449
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01111
Cluster EST : UnigeneHs.615028 [ NCBI ]
CGAP (NCI)Hs.615028
Alternative Splicing GalleryENSG00000254300
Gene ExpressionLINC01111 [ NCBI-GEO ]   LINC01111 [ EBI - ARRAY_EXPRESS ]   LINC01111 [ SEEK ]   LINC01111 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01111 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101926978
GTEX Portal (Tissue expression)LINC01111
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01111
DMDM Disease mutations101926978
Blocks (Seattle)LINC01111
Human Protein AtlasENSG00000254300
Protein Interaction databases
FunCoupENSG00000254300
BioGRIDLINC01111
STRING (EMBL)LINC01111
ZODIACLINC01111
Ontologies - Pathways
Huge Navigator LINC01111 [HugePedia]
snp3D : Map Gene to Disease101926978
BioCentury BCIQLINC01111
ClinGenLINC01111
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101926978
Clinical trialLINC01111
Miscellaneous
canSAR (ICR)LINC01111 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01111
EVEXLINC01111
GoPubMedLINC01111
iHOPLINC01111
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:58:09 CEST 2017

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