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LINC01115 (long intergenic non-protein coding RNA 1115)

Identity

Other alias-
HGNC (Hugo) LINC01115
LocusID (NCBI) 339822
Atlas_Id 65797
Location 2p25.3  [Link to chromosome band 2p25]
Location_base_pair Starts at 779840 and ends at 868426 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01115   49258
Cards
Entrez_Gene (NCBI)LINC01115  339822  long intergenic non-protein coding RNA 1115
Aliases
GeneCards (Weizmann)LINC01115
Ensembl hg19 (Hinxton)ENSG00000237667 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237667 [Gene_View]  chr2:779840-868426 [Contig_View]  LINC01115 [Vega]
ICGC DataPortalENSG00000237667
TCGA cBioPortalLINC01115
AceView (NCBI)LINC01115
Genatlas (Paris)LINC01115
WikiGenes339822
SOURCE (Princeton)LINC01115
Genetics Home Reference (NIH)LINC01115
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01115  -     chr2:779840-868426 -  2p25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01115  -     2p25.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01115 - 2p25.3 [CytoView hg19]  LINC01115 - 2p25.3 [CytoView hg38]
Mapping of homologs : NCBILINC01115 [Mapview hg19]  LINC01115 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043553 BC128382 BC128434 BC128532
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_187525
Consensus coding sequences : CCDS (NCBI)LINC01115
Cluster EST : UnigeneHs.651879 [ NCBI ]
CGAP (NCI)Hs.651879
Alternative Splicing GalleryENSG00000237667
Gene ExpressionLINC01115 [ NCBI-GEO ]   LINC01115 [ EBI - ARRAY_EXPRESS ]   LINC01115 [ SEEK ]   LINC01115 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01115 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)339822
GTEX Portal (Tissue expression)LINC01115
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01115
DMDM Disease mutations339822
Blocks (Seattle)LINC01115
Human Protein AtlasENSG00000237667
IPIIPI00980537   
Protein Interaction databases
FunCoupENSG00000237667
BioGRIDLINC01115
STRING (EMBL)LINC01115
ZODIACLINC01115
Ontologies - Pathways
Huge Navigator LINC01115 [HugePedia]
snp3D : Map Gene to Disease339822
BioCentury BCIQLINC01115
ClinGenLINC01115
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD339822
Clinical trialLINC01115
Miscellaneous
canSAR (ICR)LINC01115 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01115
EVEXLINC01115
GoPubMedLINC01115
iHOPLINC01115
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:58:09 CEST 2017

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