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LINC01116 (long intergenic non-protein coding RNA 1116)

Identity

Other alias-
HGNC (Hugo) LINC01116
LocusID (NCBI) 375295
Atlas_Id 65798
Location 2q31.1  [Link to chromosome band 2q31]
Location_base_pair Starts at 177494309 and ends at 177502302 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01116   49259
Cards
Entrez_Gene (NCBI)LINC01116  375295  long intergenic non-protein coding RNA 1116
Aliases
GeneCards (Weizmann)LINC01116
Ensembl hg19 (Hinxton) [Gene_View]  chr2:177494309-177502302 [Contig_View]  LINC01116 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:177494309-177502302 [Contig_View]  LINC01116 [Vega]
TCGA cBioPortalLINC01116
AceView (NCBI)LINC01116
Genatlas (Paris)LINC01116
WikiGenes375295
SOURCE (Princeton)LINC01116
Genetics Home Reference (NIH)LINC01116
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01116  -     chr2:177494309-177502302 -  2q31.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01116  -     2q31.1   [Description]    (hg38-Dec_2013)
EnsemblLINC01116 - 2q31.1 [CytoView hg19]  LINC01116 - 2q31.1 [CytoView hg38]
Mapping of homologs : NCBILINC01116 [Mapview hg19]  LINC01116 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI766085 BC013438 BC013588 BE908176 BF029957
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_005403 NW_004929305
Consensus coding sequences : CCDS (NCBI)LINC01116
Cluster EST : UnigeneHs.636452 [ NCBI ]
CGAP (NCI)Hs.636452
Gene ExpressionLINC01116 [ NCBI-GEO ]   LINC01116 [ EBI - ARRAY_EXPRESS ]   LINC01116 [ SEEK ]   LINC01116 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01116 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)375295
GTEX Portal (Tissue expression)LINC01116
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01116
DMDM Disease mutations375295
Blocks (Seattle)LINC01116
IPIIPI00060570   
Protein Interaction databases
BioGRIDLINC01116
STRING (EMBL)LINC01116
ZODIACLINC01116
Ontologies - Pathways
Huge Navigator LINC01116 [HugePedia]
snp3D : Map Gene to Disease375295
BioCentury BCIQLINC01116
ClinGenLINC01116
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD375295
Clinical trialLINC01116
Miscellaneous
canSAR (ICR)LINC01116 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01116
EVEXLINC01116
GoPubMedLINC01116
iHOPLINC01116
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:13:07 CET 2017

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