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LINC01118 (long intergenic non-protein coding RNA 1118)

Identity

Other alias-
HGNC (Hugo) LINC01118
LocusID (NCBI) 388948
Atlas_Id 65800
Location 2p21  [Link to chromosome band 2p21]
Location_base_pair Starts at 47043807 and ends at 47049799 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01118   49261
Cards
Entrez_Gene (NCBI)LINC01118  388948  long intergenic non-protein coding RNA 1118
Aliases
GeneCards (Weizmann)LINC01118
Ensembl hg19 (Hinxton)ENSG00000222005 [Gene_View]  chr2:47043807-47049799 [Contig_View]  LINC01118 [Vega]
Ensembl hg38 (Hinxton)ENSG00000222005 [Gene_View]  chr2:47043807-47049799 [Contig_View]  LINC01118 [Vega]
ICGC DataPortalENSG00000222005
TCGA cBioPortalLINC01118
AceView (NCBI)LINC01118
Genatlas (Paris)LINC01118
WikiGenes388948
SOURCE (Princeton)LINC01118
Genetics Home Reference (NIH)LINC01118
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01118  -     chr2:47043807-47049799 +  2p21   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01118  -     2p21   [Description]    (hg38-Dec_2013)
EnsemblLINC01118 - 2p21 [CytoView hg19]  LINC01118 - 2p21 [CytoView hg38]
Mapping of homologs : NCBILINC01118 [Mapview hg19]  LINC01118 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC062774 BC092505 BQ013369 LN607915 LN607916
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_022184 NW_004929300
Consensus coding sequences : CCDS (NCBI)LINC01118
Cluster EST : UnigeneHs.728895 [ NCBI ]
CGAP (NCI)Hs.728895
Alternative Splicing GalleryENSG00000222005
Gene ExpressionLINC01118 [ NCBI-GEO ]   LINC01118 [ EBI - ARRAY_EXPRESS ]   LINC01118 [ SEEK ]   LINC01118 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01118 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)388948
GTEX Portal (Tissue expression)LINC01118
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01118
DMDM Disease mutations388948
Blocks (Seattle)LINC01118
Human Protein AtlasENSG00000222005
IPIIPI00807700   IPI00915905   
Protein Interaction databases
FunCoupENSG00000222005
BioGRIDLINC01118
STRING (EMBL)LINC01118
ZODIACLINC01118
Ontologies - Pathways
Huge Navigator LINC01118 [HugePedia]
snp3D : Map Gene to Disease388948
BioCentury BCIQLINC01118
ClinGenLINC01118
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD388948
Clinical trialLINC01118
Miscellaneous
canSAR (ICR)LINC01118 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01118
EVEXLINC01118
GoPubMedLINC01118
iHOPLINC01118
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:13:07 CET 2017

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