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LINC01123 (long intergenic non-protein coding RNA 1123)

Identity

Other alias-
HGNC (Hugo) LINC01123
LocusID (NCBI) 440894
Atlas_Id 65805
Location 2q13  [Link to chromosome band 2q13]
Location_base_pair Starts at 109986980 and ends at 109995281 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01123   49269
Cards
Entrez_Gene (NCBI)LINC01123  440894  long intergenic non-protein coding RNA 1123
Aliases
GeneCards (Weizmann)LINC01123
Ensembl hg19 (Hinxton)ENSG00000204588 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204588 [Gene_View]  chr2:109986980-109995281 [Contig_View]  LINC01123 [Vega]
ICGC DataPortalENSG00000204588
TCGA cBioPortalLINC01123
AceView (NCBI)LINC01123
Genatlas (Paris)LINC01123
WikiGenes440894
SOURCE (Princeton)LINC01123
Genetics Home Reference (NIH)LINC01123
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01123  -     chr2:109986980-109995281 +  2q13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01123  -     2q13   [Description]    (hg19-Feb_2009)
EnsemblLINC01123 - 2q13 [CytoView hg19]  LINC01123 - 2q13 [CytoView hg38]
Mapping of homologs : NCBILINC01123 [Mapview hg19]  LINC01123 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056084 BC101448 BP247062 DA999847
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01123
Cluster EST : UnigeneHs.516403 [ NCBI ]
CGAP (NCI)Hs.516403
Alternative Splicing GalleryENSG00000204588
Gene ExpressionLINC01123 [ NCBI-GEO ]   LINC01123 [ EBI - ARRAY_EXPRESS ]   LINC01123 [ SEEK ]   LINC01123 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01123 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)440894
GTEX Portal (Tissue expression)LINC01123
Human Protein AtlasENSG00000204588-LINC01123 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01123
DMDM Disease mutations440894
Blocks (Seattle)LINC01123
Human Protein Atlas [tissue]ENSG00000204588-LINC01123 [tissue]
Protein Interaction databases
FunCoupENSG00000204588
BioGRIDLINC01123
STRING (EMBL)LINC01123
ZODIACLINC01123
Ontologies - Pathways
Huge Navigator LINC01123 [HugePedia]
snp3D : Map Gene to Disease440894
BioCentury BCIQLINC01123
ClinGenLINC01123
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440894
Clinical trialLINC01123
Miscellaneous
canSAR (ICR)LINC01123 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01123
EVEXLINC01123
GoPubMedLINC01123
iHOPLINC01123
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:04:58 CET 2017

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