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LINC01125 (long intergenic non-protein coding RNA 1125)

Identity

Other alias-
HGNC (Hugo) LINC01125
LocusID (NCBI) 728537
Atlas_Id 65807
Location 2q11.2  [Link to chromosome band 2q11]
Location_base_pair Starts at 98286206 and ends at 98319529 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01125   49272
Cards
Entrez_Gene (NCBI)LINC01125  728537  long intergenic non-protein coding RNA 1125
Aliases
GeneCards (Weizmann)LINC01125
Ensembl hg19 (Hinxton)ENSG00000228486 [Gene_View]  chr2:98286206-98319529 [Contig_View]  LINC01125 [Vega]
Ensembl hg38 (Hinxton)ENSG00000228486 [Gene_View]  chr2:98286206-98319529 [Contig_View]  LINC01125 [Vega]
ICGC DataPortalENSG00000228486
TCGA cBioPortalLINC01125
AceView (NCBI)LINC01125
Genatlas (Paris)LINC01125
WikiGenes728537
SOURCE (Princeton)LINC01125
Genetics Home Reference (NIH)LINC01125
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01125  -     chr2:98286206-98319529 +  2q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01125  -     2q11.2   [Description]    (hg38-Dec_2013)
EnsemblLINC01125 - 2q11.2 [CytoView hg19]  LINC01125 - 2q11.2 [CytoView hg38]
Mapping of homologs : NCBILINC01125 [Mapview hg19]  LINC01125 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA448462 AI637498 BC039374 DB066031 HG494314
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_005403 NW_004929303
Consensus coding sequences : CCDS (NCBI)LINC01125
Cluster EST : UnigeneHs.469369 [ NCBI ]
CGAP (NCI)Hs.469369
Alternative Splicing GalleryENSG00000228486
Gene ExpressionLINC01125 [ NCBI-GEO ]   LINC01125 [ EBI - ARRAY_EXPRESS ]   LINC01125 [ SEEK ]   LINC01125 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01125 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)728537
GTEX Portal (Tissue expression)LINC01125
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01125
DMDM Disease mutations728537
Blocks (Seattle)LINC01125
Human Protein AtlasENSG00000228486
Protein Interaction databases
FunCoupENSG00000228486
BioGRIDLINC01125
STRING (EMBL)LINC01125
ZODIACLINC01125
Ontologies - Pathways
Huge Navigator LINC01125 [HugePedia]
snp3D : Map Gene to Disease728537
BioCentury BCIQLINC01125
ClinGenLINC01125
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728537
Clinical trialLINC01125
Miscellaneous
canSAR (ICR)LINC01125 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01125
EVEXLINC01125
GoPubMedLINC01125
iHOPLINC01125
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:13:08 CET 2017

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