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LINC01139 (long intergenic non-protein coding RNA 1139)

Identity

Other aliasLINKA
HGNC (Hugo) LINC01139
LocusID (NCBI) 339535
Atlas_Id 56689
Location 1q43  [Link to chromosome band 1q43]
Location_base_pair Starts at 238643684 and ends at 238649317 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01139   27924
Cards
Entrez_Gene (NCBI)LINC01139  339535  long intergenic non-protein coding RNA 1139
AliasesLINKA
GeneCards (Weizmann)LINC01139
Ensembl hg19 (Hinxton) [Gene_View]  chr1:238643684-238649317 [Contig_View]  LINC01139 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:238643684-238649317 [Contig_View]  LINC01139 [Vega]
TCGA cBioPortalLINC01139
AceView (NCBI)LINC01139
Genatlas (Paris)LINC01139
WikiGenes339535
SOURCE (Princeton)LINC01139
Genetics Home Reference (NIH)LINC01139
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01139  -     chr1:238643684-238649317 -  1q43   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01139  -     1q43   [Description]    (hg38-Dec_2013)
EnsemblLINC01139 - 1q43 [CytoView hg19]  LINC01139 - 1q43 [CytoView hg38]
Mapping of homologs : NCBILINC01139 [Mapview hg19]  LINC01139 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI302836 BC044843 BC064529 BC073894 BC113688
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01139
Cluster EST : UnigeneHs.532047 [ NCBI ]
CGAP (NCI)Hs.532047
Gene ExpressionLINC01139 [ NCBI-GEO ]   LINC01139 [ EBI - ARRAY_EXPRESS ]   LINC01139 [ SEEK ]   LINC01139 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01139 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)339535
GTEX Portal (Tissue expression)LINC01139
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01139
DMDM Disease mutations339535
Blocks (Seattle)LINC01139
IPIIPI00915995   
Protein Interaction databases
BioGRIDLINC01139
STRING (EMBL)LINC01139
ZODIACLINC01139
Ontologies - Pathways
Huge Navigator LINC01139 [HugePedia]
snp3D : Map Gene to Disease339535
BioCentury BCIQLINC01139
ClinGenLINC01139
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD339535
Clinical trialLINC01139
Miscellaneous
canSAR (ICR)LINC01139 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01139
EVEXLINC01139
GoPubMedLINC01139
iHOPLINC01139
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 13:12:55 CET 2017

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