Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01144 (long intergenic non-protein coding RNA 1144)

Identity

Alias_symbol (synonym)TCONS_00000513
Other alias-
HGNC (Hugo) LINC01144
LocusID (NCBI) 400752
Atlas_Id 65821
Location 1p34.1  [Link to chromosome band 1p34]
Location_base_pair Starts at 45303910 and ends at 45305619 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01144   49460
Cards
Entrez_Gene (NCBI)LINC01144  400752  long intergenic non-protein coding RNA 1144
Aliases
GeneCards (Weizmann)LINC01144
Ensembl hg19 (Hinxton)ENSG00000281912 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000281912 [Gene_View]  chr1:45303910-45305619 [Contig_View]  LINC01144 [Vega]
ICGC DataPortalENSG00000281912
TCGA cBioPortalLINC01144
AceView (NCBI)LINC01144
Genatlas (Paris)LINC01144
WikiGenes400752
SOURCE (Princeton)LINC01144
Genetics Home Reference (NIH)LINC01144
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01144  -     chr1:45303910-45305619 +  1p34.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01144  -     1p34.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01144 - 1p34.1 [CytoView hg19]  LINC01144 - 1p34.1 [CytoView hg38]
Mapping of homologs : NCBILINC01144 [Mapview hg19]  LINC01144 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC006119 BC035497
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01144
Cluster EST : UnigeneHs.334348 [ NCBI ]
CGAP (NCI)Hs.334348
Alternative Splicing GalleryENSG00000281912
Gene ExpressionLINC01144 [ NCBI-GEO ]   LINC01144 [ EBI - ARRAY_EXPRESS ]   LINC01144 [ SEEK ]   LINC01144 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01144 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)400752
GTEX Portal (Tissue expression)LINC01144
Human Protein AtlasENSG00000281912-LINC01144 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01144
DMDM Disease mutations400752
Blocks (Seattle)LINC01144
Human Protein Atlas [tissue]ENSG00000281912-LINC01144 [tissue]
IPIIPI00401652   
Protein Interaction databases
FunCoupENSG00000281912
BioGRIDLINC01144
STRING (EMBL)LINC01144
ZODIACLINC01144
Ontologies - Pathways
Huge Navigator LINC01144 [HugePedia]
snp3D : Map Gene to Disease400752
BioCentury BCIQLINC01144
ClinGenLINC01144
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400752
Clinical trialLINC01144
Miscellaneous
canSAR (ICR)LINC01144 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01144
EVEXLINC01144
GoPubMedLINC01144
iHOPLINC01144
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:55:38 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.