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LINC01153 (long intergenic non-protein coding RNA 1153)

Identity

Other alias-
HGNC (Hugo) LINC01153
LocusID (NCBI) 101927889
Atlas_Id 77631
Location 10q26.12  [Link to chromosome band 10q26]
Location_base_pair Starts at 121178700 and ends at 121185966 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01153   49495
Cards
Entrez_Gene (NCBI)LINC01153  101927889  long intergenic non-protein coding RNA 1153
Aliases
GeneCards (Weizmann)LINC01153
Ensembl hg19 (Hinxton)ENSG00000227143 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227143 [Gene_View]  chr10:121178700-121185966 [Contig_View]  LINC01153 [Vega]
ICGC DataPortalENSG00000227143
TCGA cBioPortalLINC01153
AceView (NCBI)LINC01153
Genatlas (Paris)LINC01153
WikiGenes101927889
SOURCE (Princeton)LINC01153
Genetics Home Reference (NIH)LINC01153
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01153  -     chr10:121178700-121185966 +  10q26.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01153  -     10q26.12   [Description]    (hg19-Feb_2009)
EnsemblLINC01153 - 10q26.12 [CytoView hg19]  LINC01153 - 10q26.12 [CytoView hg38]
Mapping of homologs : NCBILINC01153 [Mapview hg19]  LINC01153 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC037739
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01153
Cluster EST : UnigeneHs.385516 [ NCBI ]
CGAP (NCI)Hs.385516
Alternative Splicing GalleryENSG00000227143
Gene ExpressionLINC01153 [ NCBI-GEO ]   LINC01153 [ EBI - ARRAY_EXPRESS ]   LINC01153 [ SEEK ]   LINC01153 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01153 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927889
GTEX Portal (Tissue expression)LINC01153
Human Protein AtlasENSG00000227143-LINC01153 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01153
DMDM Disease mutations101927889
Blocks (Seattle)LINC01153
Human Protein Atlas [tissue]ENSG00000227143-LINC01153 [tissue]
Protein Interaction databases
FunCoupENSG00000227143
BioGRIDLINC01153
STRING (EMBL)LINC01153
ZODIACLINC01153
Ontologies - Pathways
Huge Navigator LINC01153 [HugePedia]
snp3D : Map Gene to Disease101927889
BioCentury BCIQLINC01153
ClinGenLINC01153
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927889
Clinical trialLINC01153
Miscellaneous
canSAR (ICR)LINC01153 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01153
EVEXLINC01153
GoPubMedLINC01153
iHOPLINC01153
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:21:54 CET 2017

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