Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01160 (long intergenic non-protein coding RNA 1160)


Alias (NCBI)-
HGNC (Hugo) LINC01160
LocusID (NCBI) 100129269
Atlas_Id 65827
Location 1p13.2  [Link to chromosome band 1p13]
Location_base_pair Starts at 111599007 and ends at 111608318 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC01160   49525
Entrez_Gene (NCBI)LINC01160    long intergenic non-protein coding RNA 1160
GeneCards (Weizmann)LINC01160
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr1:111599007-111608318 [Contig_View]  LINC01160 [Vega]
TCGA cBioPortalLINC01160
AceView (NCBI)LINC01160
Genatlas (Paris)LINC01160
SOURCE (Princeton)LINC01160
Genetics Home Reference (NIH)LINC01160
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01160  -     chr1:111599007-111608318 -  1p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01160  -     1p13.2   [Description]    (hg19-Feb_2009)
GoldenPathLINC01160 - 1p13.2 [CytoView hg19]  LINC01160 - 1p13.2 [CytoView hg38]
genome Data Viewer NCBILINC01160 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AL553535 AL576506 BC063548
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01160
Gene ExpressionLINC01160 [ NCBI-GEO ]   LINC01160 [ EBI - ARRAY_EXPRESS ]   LINC01160 [ SEEK ]   LINC01160 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01160 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01160 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100129269
GTEX Portal (Tissue expression)LINC01160
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01160
Blocks (Seattle)LINC01160
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:01:42 CET 2020

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