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LINC01162 (long intergenic non-protein coding RNA 1162)

Identity

Other alias-
HGNC (Hugo) LINC01162
LocusID (NCBI) 104355138
Atlas_Id 76556
Location 7p21.1  [Link to chromosome band 7p21]
Location_base_pair Starts at 20835431 and ends at 21023148 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01162   49528
Cards
Entrez_Gene (NCBI)LINC01162  104355138  long intergenic non-protein coding RNA 1162
Aliases
GeneCards (Weizmann)LINC01162
Ensembl hg19 (Hinxton)ENSG00000232790 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232790 [Gene_View]  chr7:20835431-21023148 [Contig_View]  LINC01162 [Vega]
ICGC DataPortalENSG00000232790
TCGA cBioPortalLINC01162
AceView (NCBI)LINC01162
Genatlas (Paris)LINC01162
WikiGenes104355138
SOURCE (Princeton)LINC01162
Genetics Home Reference (NIH)LINC01162
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01162  -     chr7:20835431-21023148 +  7p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01162  -     7p21.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01162 - 7p21.1 [CytoView hg19]  LINC01162 - 7p21.1 [CytoView hg38]
Mapping of homologs : NCBILINC01162 [Mapview hg19]  LINC01162 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CN412322
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01162
Cluster EST : UnigeneHs.650722 [ NCBI ]
CGAP (NCI)Hs.650722
Alternative Splicing GalleryENSG00000232790
Gene ExpressionLINC01162 [ NCBI-GEO ]   LINC01162 [ EBI - ARRAY_EXPRESS ]   LINC01162 [ SEEK ]   LINC01162 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01162 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104355138
GTEX Portal (Tissue expression)LINC01162
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01162
DMDM Disease mutations104355138
Blocks (Seattle)LINC01162
Human Protein AtlasENSG00000232790
Protein Interaction databases
FunCoupENSG00000232790
BioGRIDLINC01162
STRING (EMBL)LINC01162
ZODIACLINC01162
Ontologies - Pathways
Huge Navigator LINC01162 [HugePedia]
snp3D : Map Gene to Disease104355138
BioCentury BCIQLINC01162
ClinGenLINC01162
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104355138
Clinical trialLINC01162
Miscellaneous
canSAR (ICR)LINC01162 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01162
EVEXLINC01162
GoPubMedLINC01162
iHOPLINC01162
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:14:08 CEST 2017

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