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LINC01163 (long intergenic non-protein coding RNA 1163)

Identity

Alias_symbol (synonym)TCONS_00017722
Other alias
HGNC (Hugo) LINC01163
LocusID (NCBI) 101927381
Atlas_Id 65828
Location 10q26.2  [Link to chromosome band 10q26]
Location_base_pair Starts at 128285950 and ends at 128317726 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01163   49530
Cards
Entrez_Gene (NCBI)LINC01163  101927381  long intergenic non-protein coding RNA 1163
AliasesTCONS_00017722
GeneCards (Weizmann)LINC01163
Ensembl hg19 (Hinxton)ENSG00000280953 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000280953 [Gene_View]  chr10:128285950-128317726 [Contig_View]  LINC01163 [Vega]
ICGC DataPortalENSG00000280953
TCGA cBioPortalLINC01163
AceView (NCBI)LINC01163
Genatlas (Paris)LINC01163
WikiGenes101927381
SOURCE (Princeton)LINC01163
Genetics Home Reference (NIH)LINC01163
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01163  -     chr10:128285950-128317726 +  10q26.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01163  -     10q26.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01163 - 10q26.2 [CytoView hg19]  LINC01163 - 10q26.2 [CytoView hg38]
Mapping of homologs : NCBILINC01163 [Mapview hg19]  LINC01163 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK124226
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01163
Cluster EST : UnigeneHs.523342 [ NCBI ]
CGAP (NCI)Hs.523342
Alternative Splicing GalleryENSG00000280953
Gene ExpressionLINC01163 [ NCBI-GEO ]   LINC01163 [ EBI - ARRAY_EXPRESS ]   LINC01163 [ SEEK ]   LINC01163 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01163 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927381
GTEX Portal (Tissue expression)LINC01163
Human Protein AtlasENSG00000280953-LINC01163 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01163
DMDM Disease mutations101927381
Blocks (Seattle)LINC01163
Human Protein Atlas [tissue]ENSG00000280953-LINC01163 [tissue]
Protein Interaction databases
FunCoupENSG00000280953
BioGRIDLINC01163
STRING (EMBL)LINC01163
ZODIACLINC01163
Ontologies - Pathways
Huge Navigator LINC01163 [HugePedia]
snp3D : Map Gene to Disease101927381
BioCentury BCIQLINC01163
ClinGenLINC01163
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927381
Clinical trialLINC01163
Miscellaneous
canSAR (ICR)LINC01163 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01163
EVEXLINC01163
GoPubMedLINC01163
iHOPLINC01163
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:55:41 CET 2017

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