Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01164 (long intergenic non-protein coding RNA 1164)

Identity

Other alias-
HGNC (Hugo) LINC01164
LocusID (NCBI) 399827
Atlas_Id 65829
Location 10q26.3  [Link to chromosome band 10q26]
Location_base_pair Starts at 131772398 and ends at 131790199 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01164   49533
Cards
Entrez_Gene (NCBI)LINC01164  399827  long intergenic non-protein coding RNA 1164
Aliases
GeneCards (Weizmann)LINC01164
Ensembl hg19 (Hinxton)ENSG00000189275 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000189275 [Gene_View]  chr10:131772398-131790199 [Contig_View]  LINC01164 [Vega]
ICGC DataPortalENSG00000189275
TCGA cBioPortalLINC01164
AceView (NCBI)LINC01164
Genatlas (Paris)LINC01164
WikiGenes399827
SOURCE (Princeton)LINC01164
Genetics Home Reference (NIH)LINC01164
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01164  -     chr10:131772398-131790199 -  10q26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01164  -     10q26.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01164 - 10q26.3 [CytoView hg19]  LINC01164 - 10q26.3 [CytoView hg38]
Mapping of homologs : NCBILINC01164 [Mapview hg19]  LINC01164 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128177
RefSeq transcript (Entrez)NM_001001677
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01164
Cluster EST : UnigeneHs.523353 [ NCBI ]
CGAP (NCI)Hs.523353
Alternative Splicing GalleryENSG00000189275
Gene ExpressionLINC01164 [ NCBI-GEO ]   LINC01164 [ EBI - ARRAY_EXPRESS ]   LINC01164 [ SEEK ]   LINC01164 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01164 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)399827
GTEX Portal (Tissue expression)LINC01164
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01164
DMDM Disease mutations399827
Blocks (Seattle)LINC01164
Human Protein AtlasENSG00000189275
HPRD13530
IPIIPI00413120   
Protein Interaction databases
FunCoupENSG00000189275
BioGRIDLINC01164
STRING (EMBL)LINC01164
ZODIACLINC01164
Ontologies - Pathways
Huge Navigator LINC01164 [HugePedia]
snp3D : Map Gene to Disease399827
BioCentury BCIQLINC01164
ClinGenLINC01164
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD399827
Clinical trialLINC01164
Miscellaneous
canSAR (ICR)LINC01164 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01164
EVEXLINC01164
GoPubMedLINC01164
iHOPLINC01164
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:14:08 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.