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LINC01166 (long intergenic non-protein coding RNA 1166)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC01166
LocusID (NCBI) 101927590
Atlas_Id 65831
Location 10q26.3  [Link to chromosome band 10q26]
Location_base_pair Starts at 132943967 and ends at 132965289 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC01166   49535
Cards
Entrez_Gene (NCBI)LINC01166    long intergenic non-protein coding RNA 1166
Aliases
GeneCards (Weizmann)LINC01166
Ensembl hg19 (Hinxton)ENSG00000232903 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232903 [Gene_View]  ENSG00000232903 [Sequence]  chr10:132943967-132965289 [Contig_View]  LINC01166 [Vega]
ICGC DataPortalENSG00000232903
TCGA cBioPortalLINC01166
AceView (NCBI)LINC01166
Genatlas (Paris)LINC01166
SOURCE (Princeton)LINC01166
Genetics Home Reference (NIH)LINC01166
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01166  -     chr10:132943967-132965289 -  10q26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01166  -     10q26.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC01166 - 10q26.3 [CytoView hg19]  LINC01166 - 10q26.3 [CytoView hg38]
ImmunoBaseENSG00000232903
Genome Data Viewer NCBILINC01166 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK095503 AK302096 DA356569 DB168259
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01166
Gene ExpressionLINC01166 [ NCBI-GEO ]   LINC01166 [ EBI - ARRAY_EXPRESS ]   LINC01166 [ SEEK ]   LINC01166 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01166 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01166 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101927590
GTEX Portal (Tissue expression)LINC01166
Human Protein AtlasENSG00000232903-LINC01166 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01166
Human Protein Atlas [tissue]ENSG00000232903-LINC01166 [tissue]
Protein Interaction databases
BioGRIDLINC01166
STRING (EMBL)LINC01166
ZODIACLINC01166
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC01166
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:57:17 CEST 2021

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