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LINC01170 (long intergenic non-protein coding RNA 1170)

Identity

Other alias-
HGNC (Hugo) LINC01170
LocusID (NCBI) 103724389
Atlas_Id 65835
Location 5q23.2  [Link to chromosome band 5q23]
Location_base_pair Starts at 123395487 and ends at 123774213 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01170   49542
Cards
Entrez_Gene (NCBI)LINC01170  103724389  long intergenic non-protein coding RNA 1170
Aliases
GeneCards (Weizmann)LINC01170
Ensembl hg19 (Hinxton) [Gene_View]  chr5:123395487-123774213 [Contig_View]  LINC01170 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:123395487-123774213 [Contig_View]  LINC01170 [Vega]
TCGA cBioPortalLINC01170
AceView (NCBI)LINC01170
Genatlas (Paris)LINC01170
WikiGenes103724389
SOURCE (Princeton)LINC01170
Genetics Home Reference (NIH)LINC01170
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01170  -     chr5:123395487-123774213 -  5q23.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01170  -     5q23.2   [Description]    (hg38-Dec_2013)
EnsemblLINC01170 - 5q23.2 [CytoView hg19]  LINC01170 - 5q23.2 [CytoView hg38]
Mapping of homologs : NCBILINC01170 [Mapview hg19]  LINC01170 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA215598 DB206454 HG498416 HY324337 N72756
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_034772 NW_004929323
Consensus coding sequences : CCDS (NCBI)LINC01170
Cluster EST : UnigeneHs.739776 [ NCBI ]
CGAP (NCI)Hs.739776
Gene ExpressionLINC01170 [ NCBI-GEO ]   LINC01170 [ EBI - ARRAY_EXPRESS ]   LINC01170 [ SEEK ]   LINC01170 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01170 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)103724389
GTEX Portal (Tissue expression)LINC01170
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01170
DMDM Disease mutations103724389
Blocks (Seattle)LINC01170
Protein Interaction databases
BioGRIDLINC01170
STRING (EMBL)LINC01170
ZODIACLINC01170
Ontologies - Pathways
Huge Navigator LINC01170 [HugePedia]
snp3D : Map Gene to Disease103724389
BioCentury BCIQLINC01170
ClinGenLINC01170
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD103724389
Clinical trialLINC01170
Miscellaneous
canSAR (ICR)LINC01170 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01170
EVEXLINC01170
GoPubMedLINC01170
iHOPLINC01170
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:13:15 CET 2017

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