Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01173 (long intergenic non-protein coding RNA 1173)

Identity

Alias_symbol (synonym)TCONS_00004057
Other alias-
HGNC (Hugo) LINC01173
LocusID (NCBI) 106144537
Atlas_Id 77781
Location 2q37.1  [Link to chromosome band 2q37]
Location_base_pair Starts at 235591312 and ends at 235626408 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01173   49545
Cards
Entrez_Gene (NCBI)LINC01173  106144537  long intergenic non-protein coding RNA 1173
Aliases
GeneCards (Weizmann)LINC01173
Ensembl hg19 (Hinxton) [Gene_View]  chr2:235591312-235626408 [Contig_View]  LINC01173 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:235591312-235626408 [Contig_View]  LINC01173 [Vega]
TCGA cBioPortalLINC01173
AceView (NCBI)LINC01173
Genatlas (Paris)LINC01173
WikiGenes106144537
SOURCE (Princeton)LINC01173
Genetics Home Reference (NIH)LINC01173
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01173  -     chr2:235591312-235626408 +  2q37.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01173  -     2q37.1   [Description]    (hg38-Dec_2013)
EnsemblLINC01173 - 2q37.1 [CytoView hg19]  LINC01173 - 2q37.1 [CytoView hg38]
Mapping of homologs : NCBILINC01173 [Mapview hg19]  LINC01173 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01173
Cluster EST : UnigeneHs.580616 [ NCBI ]
CGAP (NCI)Hs.580616
Gene ExpressionLINC01173 [ NCBI-GEO ]   LINC01173 [ EBI - ARRAY_EXPRESS ]   LINC01173 [ SEEK ]   LINC01173 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01173 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)106144537
GTEX Portal (Tissue expression)LINC01173
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01173
DMDM Disease mutations106144537
Blocks (Seattle)LINC01173
Protein Interaction databases
BioGRIDLINC01173
STRING (EMBL)LINC01173
ZODIACLINC01173
Ontologies - Pathways
Huge Navigator LINC01173 [HugePedia]
snp3D : Map Gene to Disease106144537
BioCentury BCIQLINC01173
ClinGenLINC01173
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD106144537
Clinical trialLINC01173
Miscellaneous
canSAR (ICR)LINC01173 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01173
EVEXLINC01173
GoPubMedLINC01173
iHOPLINC01173
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:13:16 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.