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LINC01179 (long intergenic non-protein coding RNA 1179)

Identity

Other alias-
HGNC (Hugo) LINC01179
LocusID (NCBI) 101928151
Atlas_Id 65837
Location 4q32.3  [Link to chromosome band 4q32]
Location_base_pair Starts at 166605791 and ends at 166683930 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01179   49556
Cards
Entrez_Gene (NCBI)LINC01179  101928151  long intergenic non-protein coding RNA 1179
Aliases
GeneCards (Weizmann)LINC01179
Ensembl hg19 (Hinxton)ENSG00000249500 [Gene_View]  chr4:166605791-166683930 [Contig_View]  LINC01179 [Vega]
Ensembl hg38 (Hinxton)ENSG00000249500 [Gene_View]  chr4:166605791-166683930 [Contig_View]  LINC01179 [Vega]
ICGC DataPortalENSG00000249500
TCGA cBioPortalLINC01179
AceView (NCBI)LINC01179
Genatlas (Paris)LINC01179
WikiGenes101928151
SOURCE (Princeton)LINC01179
Genetics Home Reference (NIH)LINC01179
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01179  -     chr4:166605791-166683930 +  4q32.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01179  -     4q32.3   [Description]    (hg38-Dec_2013)
EnsemblLINC01179 - 4q32.3 [CytoView hg19]  LINC01179 - 4q32.3 [CytoView hg38]
Mapping of homologs : NCBILINC01179 [Mapview hg19]  LINC01179 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX648971 HG497468
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_016354 NW_004929320
Consensus coding sequences : CCDS (NCBI)LINC01179
Cluster EST : UnigeneHs.639858 [ NCBI ]
CGAP (NCI)Hs.639858
Alternative Splicing GalleryENSG00000249500
Gene ExpressionLINC01179 [ NCBI-GEO ]   LINC01179 [ EBI - ARRAY_EXPRESS ]   LINC01179 [ SEEK ]   LINC01179 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01179 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928151
GTEX Portal (Tissue expression)LINC01179
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01179
DMDM Disease mutations101928151
Blocks (Seattle)LINC01179
Human Protein AtlasENSG00000249500
Protein Interaction databases
FunCoupENSG00000249500
BioGRIDLINC01179
STRING (EMBL)LINC01179
ZODIACLINC01179
Ontologies - Pathways
Huge Navigator LINC01179 [HugePedia]
snp3D : Map Gene to Disease101928151
BioCentury BCIQLINC01179
ClinGenLINC01179
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928151
Clinical trialLINC01179
Miscellaneous
canSAR (ICR)LINC01179 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01179
EVEXLINC01179
GoPubMedLINC01179
iHOPLINC01179
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:13:16 CET 2017

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