Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01189 (long intergenic non-protein coding RNA 1189)

Identity

Other alias-
HGNC (Hugo) LINC01189
LocusID (NCBI) 643648
Atlas_Id 65845
Location 9p11.2  [Link to chromosome band 9p11]
Location_base_pair Starts at 46763791 and ends at 46833319 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01189   49592
Cards
Entrez_Gene (NCBI)LINC01189  643648  long intergenic non-protein coding RNA 1189
Aliases
GeneCards (Weizmann)LINC01189
Ensembl hg19 (Hinxton) [Gene_View]  chr9:46763791-46833319 [Contig_View]  LINC01189 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:46763791-46833319 [Contig_View]  LINC01189 [Vega]
TCGA cBioPortalLINC01189
AceView (NCBI)LINC01189
Genatlas (Paris)LINC01189
WikiGenes643648
SOURCE (Princeton)LINC01189
Genetics Home Reference (NIH)LINC01189
Genomic and cartography
GoldenPath hg19 (UCSC)LINC01189  -     chr9:46763791-46833319 +  9p11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC01189  -     9p11.2   [Description]    (hg38-Dec_2013)
EnsemblLINC01189 - 9p11.2 [CytoView hg19]  LINC01189 - 9p11.2 [CytoView hg38]
Mapping of homologs : NCBILINC01189 [Mapview hg19]  LINC01189 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC032596 HG502063
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_086755 NW_004929349
Consensus coding sequences : CCDS (NCBI)LINC01189
Cluster EST : UnigeneHs.640178 [ NCBI ]
CGAP (NCI)Hs.640178
Gene ExpressionLINC01189 [ NCBI-GEO ]   LINC01189 [ EBI - ARRAY_EXPRESS ]   LINC01189 [ SEEK ]   LINC01189 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01189 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)643648
GTEX Portal (Tissue expression)LINC01189
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01189
DMDM Disease mutations643648
Blocks (Seattle)LINC01189
IPIIPI00880149   
Protein Interaction databases
BioGRIDLINC01189
STRING (EMBL)LINC01189
ZODIACLINC01189
Ontologies - Pathways
Huge Navigator LINC01189 [HugePedia]
snp3D : Map Gene to Disease643648
BioCentury BCIQLINC01189
ClinGenLINC01189
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD643648
Clinical trialLINC01189
Miscellaneous
canSAR (ICR)LINC01189 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01189
EVEXLINC01189
GoPubMedLINC01189
iHOPLINC01189
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:13:18 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.